Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TM4SF1P30408 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 PDXDC2P-206ENST00000534700 1315 ntBASIC17.84■□□□□ 0.45
TM4SF1P30408 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF1P30408 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.84■□□□□ 0.45
TM4SF1P30408 AL451000.1-201ENST00000451300 1186 ntBASIC17.84■□□□□ 0.45
TM4SF1P30408 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TM4SF1P30408 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF1P30408 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TM4SF1P30408 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TM4SF1P30408 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.84■□□□□ 0.45
TM4SF1P30408 MIR5001-201ENST00000580185 100 ntBASIC17.84■□□□□ 0.45
TM4SF1P30408 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF1P30408 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
TM4SF1P30408 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TM4SF1P30408 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.83■□□□□ 0.45
TM4SF1P30408 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.83■□□□□ 0.45
TM4SF1P30408 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TM4SF1P30408 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TM4SF1P30408 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TM4SF1P30408 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TM4SF1P30408 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF1P30408 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.83■□□□□ 0.45
TM4SF1P30408 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 OR7E115P-201ENST00000382617 1024 ntBASIC17.83■□□□□ 0.44
TM4SF1P30408 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.83■□□□□ 0.44
TM4SF1P30408 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 PSAT1P2-201ENST00000426107 972 ntBASIC17.83■□□□□ 0.44
TM4SF1P30408 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.83■□□□□ 0.44
TM4SF1P30408 STK24P1-201ENST00000455035 1291 ntBASIC17.83■□□□□ 0.44
TM4SF1P30408 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 PRSS3P1-201ENST00000503996 742 ntBASIC17.83■□□□□ 0.44
TM4SF1P30408 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.83■□□□□ 0.44
TM4SF1P30408 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.83■□□□□ 0.44
TM4SF1P30408 AC104506.1-201ENST00000609247 429 ntBASIC17.83■□□□□ 0.44
TM4SF1P30408 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.83■□□□□ 0.44
TM4SF1P30408 AP000769.1-203ENST00000637245 208 ntBASIC17.83■□□□□ 0.44
TM4SF1P30408 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TM4SF1P30408 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 AC006486.2-201ENST00000624246 2199 ntBASIC17.83■□□□□ 0.44
TM4SF1P30408 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF1P30408 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.83■□□□□ 0.44
TM4SF1P30408 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF1P30408 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF1P30408 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TM4SF1P30408 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF1P30408 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF1P30408 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.82■□□□□ 0.44
TM4SF1P30408 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.82■□□□□ 0.44
TM4SF1P30408 AP000354.1-201ENST00000396982 456 ntBASIC17.82■□□□□ 0.44
TM4SF1P30408 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF1P30408 AL929302.1-201ENST00000426556 871 ntBASIC17.82■□□□□ 0.44
TM4SF1P30408 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.82■□□□□ 0.44
TM4SF1P30408 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF1P30408 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF1P30408 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF1P30408 EEF1GP8-201ENST00000506566 1154 ntBASIC17.82■□□□□ 0.44
TM4SF1P30408 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF1P30408 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms