Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
RFX1P22670 RN7SKP230-201ENST00000365642 335 ntBASIC16.05■□□□□ 0.16
RFX1P22670 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 MPRIPP1-201ENST00000452433 1089 ntBASIC16.05■□□□□ 0.16
RFX1P22670 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 ALG3P1-201ENST00000508806 1114 ntBASIC16.05■□□□□ 0.16
RFX1P22670 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.05■□□□□ 0.16
RFX1P22670 ENPP7P14-201ENST00000621765 1040 ntBASIC16.05■□□□□ 0.16
RFX1P22670 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 MYADML-201ENST00000474610 2147 ntBASIC16.04■□□□□ 0.16
RFX1P22670 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.04■□□□□ 0.16
RFX1P22670 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 POM121L8P-201ENST00000417732 1281 ntBASIC16.04■□□□□ 0.16
RFX1P22670 HINT2P1-201ENST00000419438 481 ntBASIC16.04■□□□□ 0.16
RFX1P22670 FAM197Y7-201ENST00000432892 766 ntBASIC16.04■□□□□ 0.16
RFX1P22670 POM121L9P-203ENST00000441984 1285 ntBASIC16.04■□□□□ 0.16
RFX1P22670 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.04■□□□□ 0.16
RFX1P22670 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.04■□□□□ 0.16
RFX1P22670 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.04■□□□□ 0.16
RFX1P22670 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.04■□□□□ 0.16
RFX1P22670 AC004466.1-201ENST00000599515 1080 ntBASIC16.04■□□□□ 0.16
RFX1P22670 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.04■□□□□ 0.16
RFX1P22670 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 AC097376.2-205ENST00000610159 5334 ntBASIC16.04■□□□□ 0.16
RFX1P22670 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RFX1P22670 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
RFX1P22670 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFX1P22670 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RFX1P22670 SNX18-202ENST00000343017 3140 ntBASIC16.03■□□□□ 0.16
RFX1P22670 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 AC090505.1-201ENST00000430515 1834 ntBASIC16.03■□□□□ 0.16
RFX1P22670 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFX1P22670 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 CLUHP2-201ENST00000426660 1303 ntBASIC16.03■□□□□ 0.16
RFX1P22670 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.03■□□□□ 0.16
RFX1P22670 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.03■□□□□ 0.16
RFX1P22670 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms