Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.14■□□□□ 0.17
CLTAP09496 FAM8A2P-201ENST00000528813 1142 ntBASIC16.14■□□□□ 0.17
CLTAP09496 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.14■□□□□ 0.17
CLTAP09496 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.14■□□□□ 0.17
CLTAP09496 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.14■□□□□ 0.17
CLTAP09496 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 AC005695.3-201ENST00000614522 232 ntBASIC16.14■□□□□ 0.17
CLTAP09496 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLTAP09496 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.14■□□□□ 0.17
CLTAP09496 AL137784.3-201ENST00000623858 2288 ntBASIC16.14■□□□□ 0.17
CLTAP09496 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLTAP09496 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLTAP09496 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 AL354877.1-201ENST00000424412 413 ntBASIC16.13■□□□□ 0.17
CLTAP09496 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.13■□□□□ 0.17
CLTAP09496 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.13■□□□□ 0.17
CLTAP09496 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.13■□□□□ 0.17
CLTAP09496 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.13■□□□□ 0.17
CLTAP09496 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.13■□□□□ 0.17
CLTAP09496 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLTAP09496 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLTAP09496 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLTAP09496 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CLTAP09496 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLTAP09496 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
CLTAP09496 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CLTAP09496 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLTAP09496 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLTAP09496 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.12■□□□□ 0.17
CLTAP09496 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 POM121L10P-201ENST00000436994 1285 ntBASIC16.12■□□□□ 0.17
CLTAP09496 PUDPP3-201ENST00000445368 636 ntBASIC16.12■□□□□ 0.17
CLTAP09496 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.12■□□□□ 0.17
CLTAP09496 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.12■□□□□ 0.17
CLTAP09496 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.12■□□□□ 0.17
CLTAP09496 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.12■□□□□ 0.17
CLTAP09496 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.12■□□□□ 0.17
CLTAP09496 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.12■□□□□ 0.17
CLTAP09496 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.12■□□□□ 0.17
CLTAP09496 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms