Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HTR1AP08908 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.46□□□□□ -0.25
HTR1AP08908 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HTR1AP08908 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.46□□□□□ -0.25
HTR1AP08908 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HTR1AP08908 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
HTR1AP08908 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HTR1AP08908 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HTR1AP08908 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HTR1AP08908 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HTR1AP08908 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HTR1AP08908 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HTR1AP08908 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HTR1AP08908 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HTR1AP08908 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HTR1AP08908 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.46□□□□□ -0.26
HTR1AP08908 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
HTR1AP08908 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HTR1AP08908 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
HTR1AP08908 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HTR1AP08908 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HTR1AP08908 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HTR1AP08908 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.46□□□□□ -0.26
HTR1AP08908 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HTR1AP08908 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
HTR1AP08908 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
HTR1AP08908 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.45□□□□□ -0.26
HTR1AP08908 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HTR1AP08908 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.45□□□□□ -0.26
HTR1AP08908 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HTR1AP08908 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 TOMM22P5-201ENST00000416399 439 ntBASIC13.45□□□□□ -0.26
HTR1AP08908 AL080243.2-201ENST00000418783 582 ntBASIC13.45□□□□□ -0.26
HTR1AP08908 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.45□□□□□ -0.26
HTR1AP08908 DNAJB3-201ENST00000446806 729 ntBASIC13.45□□□□□ -0.26
HTR1AP08908 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.45□□□□□ -0.26
HTR1AP08908 AP000344.2-201ENST00000512987 629 ntBASIC13.45□□□□□ -0.26
HTR1AP08908 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.45□□□□□ -0.26
HTR1AP08908 AC004835.2-201ENST00000603762 682 ntBASIC13.45□□□□□ -0.26
HTR1AP08908 MIR6074-201ENST00000612054 107 ntBASIC13.45□□□□□ -0.26
HTR1AP08908 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
HTR1AP08908 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.45□□□□□ -0.26
HTR1AP08908 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HTR1AP08908 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HTR1AP08908 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
HTR1AP08908 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.44□□□□□ -0.26
HTR1AP08908 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HTR1AP08908 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.44□□□□□ -0.26
HTR1AP08908 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.44□□□□□ -0.26
HTR1AP08908 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HTR1AP08908 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms