Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 AC055876.2-201ENST00000531834 546 ntBASIC15.66■□□□□ 0.1
RCCD1A6NED2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 AC005498.2-205ENST00000593218 784 ntBASIC15.66■□□□□ 0.1
RCCD1A6NED2 AC093726.1-201ENST00000608064 963 ntBASIC15.66■□□□□ 0.1
RCCD1A6NED2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 AL365181.3-201ENST00000605886 3222 ntBASIC15.66■□□□□ 0.1
RCCD1A6NED2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 AL022313.4-201ENST00000562756 2046 ntBASIC15.66■□□□□ 0.1
RCCD1A6NED2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 AC114271.1-201ENST00000612689 2813 ntBASIC15.66■□□□□ 0.1
RCCD1A6NED2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 TUBB8P4-201ENST00000511806 1324 ntBASIC15.66■□□□□ 0.1
RCCD1A6NED2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 LINC02486-201ENST00000604157 3000 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 POM121L8P-201ENST00000417732 1281 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 POM121L9P-203ENST00000441984 1285 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 AL512638.1-201ENST00000457493 794 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 MESTP3-201ENST00000503460 968 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 AL391280.1-201ENST00000506969 1062 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC093004.1-201ENST00000508850 424 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC104596.2-201ENST00000512793 793 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC123567.1-201ENST00000548294 1261 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 BX088702.1-201ENST00000610784 235 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 MSTO2P-201ENST00000314835 1709 ntBASIC15.65■□□□□ 0.1
RCCD1A6NED2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RCCD1A6NED2 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RCCD1A6NED2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RCCD1A6NED2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 AC083964.2-201ENST00000623988 2396 ntBASIC15.64■□□□□ 0.09
RCCD1A6NED2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RCCD1A6NED2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RCCD1A6NED2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms