Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LOC102724428A0A0B4J2F2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LOC102724428A0A0B4J2F2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LOC102724428A0A0B4J2F2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LOC102724428A0A0B4J2F2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LOC102724428A0A0B4J2F2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.34■□□□□ 0.53
LOC102724428A0A0B4J2F2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LOC102724428A0A0B4J2F2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LOC102724428A0A0B4J2F2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 AL161932.2-201ENST00000435436 679 ntBASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 RN7SL788P-201ENST00000460504 316 ntBASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC005740.1-201ENST00000515639 522 ntBASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC013553.1-201ENST00000560906 267 ntBASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC091951.1-201ENST00000512854 2465 ntBASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
LOC102724428A0A0B4J2F2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 LINC00265-2P-201ENST00000413372 782 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 BX679664.3-201ENST00000414070 555 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 ACTBP7-201ENST00000418351 1124 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 GRPEL2P1-201ENST00000453145 339 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC063952.3-201ENST00000467756 308 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC113935.1-201ENST00000471722 555 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 RN7SL375P-201ENST00000492442 298 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC106047.2-201ENST00000511723 743 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 SORD2P-201ENST00000558556 1069 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC008972.2-201ENST00000606587 494 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC019109.1-201ENST00000401725 1874 ntBASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
LOC102724428A0A0B4J2F2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC018442.1-201ENST00000421439 2061 ntBASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC006529.1-201ENST00000459978 637 ntBASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.31■□□□□ 0.52
LOC102724428A0A0B4J2F2 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms