Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
MRPL39Q9NYK5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL39Q9NYK5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL39Q9NYK5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 THA1P-201ENST00000590384 1145 ntBASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL39Q9NYK5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.71■□□□□ 0.91
MRPL39Q9NYK5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.7■□□□□ 0.9
MRPL39Q9NYK5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 AL022069.1-201ENST00000568025 1636 ntBASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 AC103834.1-201ENST00000520383 144 ntBASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 PKD1P6-201ENST00000343738 4769 ntBASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL39Q9NYK5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 MIR4281-201ENST00000580852 62 ntBASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL39Q9NYK5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 YBX1P4-201ENST00000392794 808 ntBASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms