Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.08■□□□□ 0.97
UBQLN3Q9H347 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBQLN3Q9H347 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBQLN3Q9H347 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
UBQLN3Q9H347 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN3Q9H347 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN3Q9H347 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UBQLN3Q9H347 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.06■□□□□ 0.96
UBQLN3Q9H347 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN3Q9H347 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.06■□□□□ 0.96
UBQLN3Q9H347 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.06■□□□□ 0.96
UBQLN3Q9H347 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN3Q9H347 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 SNX5-217ENST00000606557 1087 ntBASIC21.05■□□□□ 0.96
UBQLN3Q9H347 AC131212.1-201ENST00000613771 668 ntBASIC21.05■□□□□ 0.96
UBQLN3Q9H347 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN3Q9H347 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN3Q9H347 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN3Q9H347 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN3Q9H347 AC010997.5-201ENST00000609182 354 ntBASIC21.04■□□□□ 0.96
UBQLN3Q9H347 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.04■□□□□ 0.96
UBQLN3Q9H347 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN3Q9H347 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBQLN3Q9H347 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.04■□□□□ 0.96
UBQLN3Q9H347 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN3Q9H347 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 MTDHP2-201ENST00000601468 714 ntBASIC21.03■□□□□ 0.96
UBQLN3Q9H347 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
UBQLN3Q9H347 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 AC012676.1-201ENST00000574705 1949 ntBASIC21.02■□□□□ 0.96
UBQLN3Q9H347 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 DUSP8P5-201ENST00000422884 1815 ntBASIC21.02■□□□□ 0.96
UBQLN3Q9H347 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.02■□□□□ 0.96
UBQLN3Q9H347 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.02■□□□□ 0.95
UBQLN3Q9H347 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBQLN3Q9H347 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 AC068473.5-201ENST00000616428 2072 ntBASIC21.01■□□□□ 0.95
UBQLN3Q9H347 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN3Q9H347 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN3Q9H347 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21■□□□□ 0.95
UBQLN3Q9H347 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN3Q9H347 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21■□□□□ 0.95
UBQLN3Q9H347 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21■□□□□ 0.95
UBQLN3Q9H347 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBQLN3Q9H347 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBQLN3Q9H347 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21■□□□□ 0.95
UBQLN3Q9H347 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21■□□□□ 0.95
UBQLN3Q9H347 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBQLN3Q9H347 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN3Q9H347 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms