Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SIK2Q9H0K1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SIK2Q9H0K1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.64■■□□□ 1.37
SIK2Q9H0K1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SIK2Q9H0K1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SIK2Q9H0K1 ALDH1A3-203ENST00000557963 1670 ntBASIC23.64■■□□□ 1.37
SIK2Q9H0K1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIK2Q9H0K1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.63■■□□□ 1.37
SIK2Q9H0K1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.63■■□□□ 1.37
SIK2Q9H0K1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SIK2Q9H0K1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SIK2Q9H0K1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.62■■□□□ 1.37
SIK2Q9H0K1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SIK2Q9H0K1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SIK2Q9H0K1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SIK2Q9H0K1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.62■■□□□ 1.37
SIK2Q9H0K1 AC131212.1-201ENST00000613771 668 ntBASIC23.62■■□□□ 1.37
SIK2Q9H0K1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SIK2Q9H0K1 AC093323.1-202ENST00000635031 2045 ntBASIC23.62■■□□□ 1.37
SIK2Q9H0K1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SIK2Q9H0K1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.62■■□□□ 1.37
SIK2Q9H0K1 AC005703.6-201ENST00000623265 1329 ntBASIC23.61■■□□□ 1.37
SIK2Q9H0K1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIK2Q9H0K1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIK2Q9H0K1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIK2Q9H0K1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.58■■□□□ 1.37
SIK2Q9H0K1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.58■■□□□ 1.36
SIK2Q9H0K1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SIK2Q9H0K1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SIK2Q9H0K1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIK2Q9H0K1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIK2Q9H0K1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.56■■□□□ 1.36
SIK2Q9H0K1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIK2Q9H0K1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIK2Q9H0K1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.55■■□□□ 1.36
SIK2Q9H0K1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIK2Q9H0K1 AL117332.1-201ENST00000622628 974 ntBASIC23.55■■□□□ 1.36
SIK2Q9H0K1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SIK2Q9H0K1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SIK2Q9H0K1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.55■■□□□ 1.36
SIK2Q9H0K1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SIK2Q9H0K1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SIK2Q9H0K1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIK2Q9H0K1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SIK2Q9H0K1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.54■■□□□ 1.36
SIK2Q9H0K1 AL356740.2-201ENST00000601559 647 ntBASIC23.54■■□□□ 1.36
SIK2Q9H0K1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIK2Q9H0K1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.54■■□□□ 1.36
SIK2Q9H0K1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.54■■□□□ 1.36
SIK2Q9H0K1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SIK2Q9H0K1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIK2Q9H0K1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms