Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ARHGEF28Q8N1W1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ARHGEF28Q8N1W1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ARHGEF28Q8N1W1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC32.04■■■□□ 2.72
ARHGEF28Q8N1W1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ARHGEF28Q8N1W1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
ARHGEF28Q8N1W1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC32.04■■■□□ 2.72
ARHGEF28Q8N1W1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
ARHGEF28Q8N1W1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ARHGEF28Q8N1W1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
ARHGEF28Q8N1W1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
ARHGEF28Q8N1W1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ARHGEF28Q8N1W1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
ARHGEF28Q8N1W1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC32.02■■■□□ 2.72
ARHGEF28Q8N1W1 AL161729.1-201ENST00000604104 1402 ntBASIC32.02■■■□□ 2.72
ARHGEF28Q8N1W1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC32.02■■■□□ 2.72
ARHGEF28Q8N1W1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ARHGEF28Q8N1W1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ARHGEF28Q8N1W1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ARHGEF28Q8N1W1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC32.01■■■□□ 2.72
ARHGEF28Q8N1W1 AC027682.1-201ENST00000562846 899 ntBASIC32.01■■■□□ 2.72
ARHGEF28Q8N1W1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
ARHGEF28Q8N1W1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
ARHGEF28Q8N1W1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
ARHGEF28Q8N1W1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC32.01■■■□□ 2.71
ARHGEF28Q8N1W1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC32■■■□□ 2.71
ARHGEF28Q8N1W1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ARHGEF28Q8N1W1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ARHGEF28Q8N1W1 MAG-206ENST00000597035 542 ntTSL 4 BASIC32■■■□□ 2.71
ARHGEF28Q8N1W1 AL138724.1-201ENST00000606771 1088 ntBASIC32■■■□□ 2.71
ARHGEF28Q8N1W1 AC136469.2-201ENST00000623944 1028 ntBASIC32■■■□□ 2.71
ARHGEF28Q8N1W1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
ARHGEF28Q8N1W1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ARHGEF28Q8N1W1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.99■■■□□ 2.71
ARHGEF28Q8N1W1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
ARHGEF28Q8N1W1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
ARHGEF28Q8N1W1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.99■■■□□ 2.71
ARHGEF28Q8N1W1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
ARHGEF28Q8N1W1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
ARHGEF28Q8N1W1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 AC092171.4-201ENST00000609130 632 ntBASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ARHGEF28Q8N1W1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 AC091305.1-201ENST00000479476 895 ntBASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.97■■■□□ 2.71
ARHGEF28Q8N1W1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.96■■■□□ 2.71
ARHGEF28Q8N1W1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.96■■■□□ 2.71
ARHGEF28Q8N1W1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.96■■■□□ 2.71
ARHGEF28Q8N1W1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
ARHGEF28Q8N1W1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
ARHGEF28Q8N1W1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ARHGEF28Q8N1W1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.95■■■□□ 2.71
ARHGEF28Q8N1W1 AC241377.3-202ENST00000626088 1088 ntBASIC31.95■■■□□ 2.71
ARHGEF28Q8N1W1 AC241585.3-202ENST00000628937 1088 ntBASIC31.95■■■□□ 2.71
ARHGEF28Q8N1W1 AC245100.8-202ENST00000629247 1058 ntBASIC31.95■■■□□ 2.71
ARHGEF28Q8N1W1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ARHGEF28Q8N1W1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
ARHGEF28Q8N1W1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ARHGEF28Q8N1W1 CA15P2-201ENST00000611168 834 ntBASIC31.95■■■□□ 2.7
ARHGEF28Q8N1W1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
ARHGEF28Q8N1W1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
ARHGEF28Q8N1W1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF28Q8N1W1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF28Q8N1W1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF28Q8N1W1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.93■■■□□ 2.7
ARHGEF28Q8N1W1 RASA4CP-201ENST00000424092 1398 ntBASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 ALDH1A3-203ENST00000557963 1670 ntBASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 AC009086.3-201ENST00000623486 1008 ntBASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 AC022211.4-201ENST00000625094 2161 ntBASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
ARHGEF28Q8N1W1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ARHGEF28Q8N1W1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
ARHGEF28Q8N1W1 AC099791.1-201ENST00000416440 715 ntBASIC31.91■■■□□ 2.7
ARHGEF28Q8N1W1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
ARHGEF28Q8N1W1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms