Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.43■□□□□ 0.54
C9orf139Q6ZV77 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.43■□□□□ 0.54
C9orf139Q6ZV77 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf139Q6ZV77 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf139Q6ZV77 C17orf82-201ENST00000623772 1530 ntBASIC18.43■□□□□ 0.54
C9orf139Q6ZV77 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf139Q6ZV77 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.42■□□□□ 0.54
C9orf139Q6ZV77 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
C9orf139Q6ZV77 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf139Q6ZV77 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.42■□□□□ 0.54
C9orf139Q6ZV77 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.42■□□□□ 0.54
C9orf139Q6ZV77 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 SERBP1P1-201ENST00000396021 1160 ntBASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 AC091305.1-201ENST00000479476 895 ntBASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 AP001330.3-201ENST00000520123 633 ntBASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 AF213884.3-201ENST00000563833 479 ntBASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 AC099791.2-201ENST00000605725 427 ntBASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf139Q6ZV77 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf139Q6ZV77 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
C9orf139Q6ZV77 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
C9orf139Q6ZV77 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 MIR4767-201ENST00000582827 78 ntBASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf139Q6ZV77 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
C9orf139Q6ZV77 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 AC027682.1-201ENST00000562846 899 ntBASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 RARRES2P6-201ENST00000567333 442 ntBASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 HLA-L-211ENST00000482052 1765 ntBASIC18.37■□□□□ 0.53
C9orf139Q6ZV77 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 RASA4CP-201ENST00000424092 1398 ntBASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 AC105265.2-201ENST00000467189 838 ntBASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.36■□□□□ 0.53
C9orf139Q6ZV77 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms