Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRRK2Q5S007 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRK2Q5S007 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRK2Q5S007 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRK2Q5S007 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRK2Q5S007 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRK2Q5S007 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.16■□□□□ 0.82
LRRK2Q5S007 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRK2Q5S007 AL354811.1-201ENST00000610286 706 ntBASIC20.16■□□□□ 0.82
LRRK2Q5S007 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.16■□□□□ 0.82
LRRK2Q5S007 AC139426.1-201ENST00000568218 2529 ntBASIC20.16■□□□□ 0.82
LRRK2Q5S007 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
LRRK2Q5S007 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRK2Q5S007 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRK2Q5S007 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.15■□□□□ 0.82
LRRK2Q5S007 IGHV3-19-201ENST00000521488 291 ntBASIC20.15■□□□□ 0.82
LRRK2Q5S007 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.15■□□□□ 0.82
LRRK2Q5S007 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.15■□□□□ 0.82
LRRK2Q5S007 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRK2Q5S007 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.15■□□□□ 0.82
LRRK2Q5S007 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.15■□□□□ 0.82
LRRK2Q5S007 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.15■□□□□ 0.82
LRRK2Q5S007 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRK2Q5S007 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRK2Q5S007 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.14■□□□□ 0.82
LRRK2Q5S007 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.14■□□□□ 0.82
LRRK2Q5S007 MIR4651-201ENST00000582622 73 ntBASIC20.14■□□□□ 0.82
LRRK2Q5S007 AL109923.1-201ENST00000618799 583 ntBASIC20.14■□□□□ 0.82
LRRK2Q5S007 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.14■□□□□ 0.81
LRRK2Q5S007 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.14■□□□□ 0.81
LRRK2Q5S007 AC126544.1-201ENST00000580842 1059 ntBASIC20.14■□□□□ 0.81
LRRK2Q5S007 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
LRRK2Q5S007 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.13■□□□□ 0.81
LRRK2Q5S007 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.13■□□□□ 0.81
LRRK2Q5S007 MIR663A-201ENST00000385250 93 ntBASIC20.13■□□□□ 0.81
LRRK2Q5S007 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRK2Q5S007 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRK2Q5S007 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRK2Q5S007 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LRRK2Q5S007 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRK2Q5S007 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.12■□□□□ 0.81
LRRK2Q5S007 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRK2Q5S007 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRK2Q5S007 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRK2Q5S007 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRK2Q5S007 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRK2Q5S007 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRK2Q5S007 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRK2Q5S007 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LRRK2Q5S007 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
LRRK2Q5S007 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRK2Q5S007 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRK2Q5S007 AC142472.1-201ENST00000612013 1741 ntBASIC20.11■□□□□ 0.81
LRRK2Q5S007 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRK2Q5S007 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.11■□□□□ 0.81
LRRK2Q5S007 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRK2Q5S007 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRK2Q5S007 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRK2Q5S007 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRK2Q5S007 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRK2Q5S007 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LRRK2Q5S007 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRK2Q5S007 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRK2Q5S007 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRK2Q5S007 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRK2Q5S007 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRK2Q5S007 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRK2Q5S007 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRK2Q5S007 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LRRK2Q5S007 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRRK2Q5S007 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRK2Q5S007 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRK2Q5S007 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
LRRK2Q5S007 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRK2Q5S007 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.09■□□□□ 0.81
LRRK2Q5S007 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRK2Q5S007 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRK2Q5S007 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRRK2Q5S007 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRK2Q5S007 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.08■□□□□ 0.81
LRRK2Q5S007 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRK2Q5S007 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRRK2Q5S007 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRK2Q5S007 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRRK2Q5S007 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRK2Q5S007 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRK2Q5S007 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRK2Q5S007 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRK2Q5S007 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRK2Q5S007 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRK2Q5S007 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.07■□□□□ 0.8
LRRK2Q5S007 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LRRK2Q5S007 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.07■□□□□ 0.8
LRRK2Q5S007 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRK2Q5S007 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRK2Q5S007 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRK2Q5S007 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms