Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC40.98■■■■■ 4.15
HMGXB3Q12766 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC40.98■■■■■ 4.15
HMGXB3Q12766 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC40.98■■■■■ 4.15
HMGXB3Q12766 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC40.97■■■■■ 4.15
HMGXB3Q12766 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC40.97■■■■■ 4.15
HMGXB3Q12766 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC40.97■■■■■ 4.15
HMGXB3Q12766 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
HMGXB3Q12766 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC40.96■■■■■ 4.15
HMGXB3Q12766 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC40.96■■■■■ 4.15
HMGXB3Q12766 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC40.96■■■■■ 4.15
HMGXB3Q12766 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC40.96■■■■■ 4.15
HMGXB3Q12766 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC40.95■■■■■ 4.15
HMGXB3Q12766 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC40.95■■■■■ 4.15
HMGXB3Q12766 NKILA-201ENST00000613231 537 ntTSL 4 BASIC40.95■■■■■ 4.15
HMGXB3Q12766 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC40.95■■■■■ 4.15
HMGXB3Q12766 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC40.94■■■■■ 4.14
HMGXB3Q12766 GTSE1-AS1-202ENST00000623117 1518 ntBASIC40.94■■■■■ 4.14
HMGXB3Q12766 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 ABHD17AP1-201ENST00000358206 933 ntBASIC40.93■■■■■ 4.14
HMGXB3Q12766 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC40.93■■■■■ 4.14
HMGXB3Q12766 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC40.92■■■■■ 4.14
HMGXB3Q12766 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC40.91■■■■■ 4.14
HMGXB3Q12766 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC40.91■■■■■ 4.14
HMGXB3Q12766 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC40.91■■■■■ 4.14
HMGXB3Q12766 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC40.91■■■■■ 4.14
HMGXB3Q12766 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC40.91■■■■■ 4.14
HMGXB3Q12766 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC40.91■■■■■ 4.14
HMGXB3Q12766 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC40.91■■■■■ 4.14
HMGXB3Q12766 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC40.9■■■■■ 4.14
HMGXB3Q12766 EMC9-206ENST00000560403 872 ntTSL 2 BASIC40.89■■■■■ 4.14
HMGXB3Q12766 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
HMGXB3Q12766 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC40.89■■■■■ 4.14
HMGXB3Q12766 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
HMGXB3Q12766 MIR6089-201ENST00000616698 64 ntBASIC40.88■■■■■ 4.14
HMGXB3Q12766 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC40.88■■■■■ 4.13
HMGXB3Q12766 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC40.88■■■■■ 4.13
HMGXB3Q12766 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC40.88■■■■■ 4.13
HMGXB3Q12766 KRT18P61-201ENST00000585825 1298 ntBASIC40.88■■■■■ 4.13
HMGXB3Q12766 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC40.87■■■■■ 4.13
HMGXB3Q12766 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
HMGXB3Q12766 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
HMGXB3Q12766 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
HMGXB3Q12766 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC40.87■■■■■ 4.13
HMGXB3Q12766 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC40.87■■■■■ 4.13
HMGXB3Q12766 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC40.86■■■■■ 4.13
HMGXB3Q12766 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC40.86■■■■■ 4.13
HMGXB3Q12766 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC40.86■■■■■ 4.13
HMGXB3Q12766 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC40.86■■■■■ 4.13
HMGXB3Q12766 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC40.85■■■■■ 4.13
HMGXB3Q12766 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC40.85■■■■■ 4.13
HMGXB3Q12766 TK2-208ENST00000545043 1120 ntTSL 2 BASIC40.85■■■■■ 4.13
HMGXB3Q12766 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
HMGXB3Q12766 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC40.85■■■■■ 4.13
HMGXB3Q12766 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC40.85■■■■■ 4.13
HMGXB3Q12766 ST7-205ENST00000393446 2114 ntTSL 5 BASIC40.85■■■■■ 4.13
HMGXB3Q12766 ERN1-208ENST00000606895 2068 ntBASIC40.85■■■■■ 4.13
HMGXB3Q12766 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
HMGXB3Q12766 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC40.84■■■■■ 4.13
HMGXB3Q12766 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
HMGXB3Q12766 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC40.83■■■■■ 4.13
HMGXB3Q12766 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC40.83■■■■■ 4.13
HMGXB3Q12766 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC40.83■■■■■ 4.13
HMGXB3Q12766 AC006015.1-201ENST00000429970 570 ntBASIC40.83■■■■■ 4.13
HMGXB3Q12766 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC40.83■■■■■ 4.13
HMGXB3Q12766 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC40.83■■■■■ 4.13
HMGXB3Q12766 NTF6G-201ENST00000591094 616 ntBASIC40.83■■■■■ 4.13
HMGXB3Q12766 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC40.83■■■■■ 4.13
HMGXB3Q12766 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC40.83■■■■■ 4.13
HMGXB3Q12766 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC40.83■■■■■ 4.13
HMGXB3Q12766 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC40.83■■■■■ 4.13
HMGXB3Q12766 pRNA.6-201ENST00000610482 90 ntBASIC40.83■■■■■ 4.13
HMGXB3Q12766 pRNA.5-201ENST00000612139 90 ntBASIC40.83■■■■■ 4.13
HMGXB3Q12766 pRNA.11-201ENST00000618423 90 ntBASIC40.83■■■■■ 4.13
HMGXB3Q12766 pRNA.13-201ENST00000619112 90 ntBASIC40.83■■■■■ 4.13
HMGXB3Q12766 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC40.83■■■■■ 4.13
HMGXB3Q12766 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC40.82■■■■■ 4.13
HMGXB3Q12766 GXYLT1P2-201ENST00000433312 1230 ntBASIC40.82■■■■■ 4.12
HMGXB3Q12766 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC40.82■■■■■ 4.12
HMGXB3Q12766 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC40.82■■■■■ 4.12
HMGXB3Q12766 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
HMGXB3Q12766 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC40.81■■■■■ 4.12
HMGXB3Q12766 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC40.81■■■■■ 4.12
HMGXB3Q12766 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC40.81■■■■■ 4.12
HMGXB3Q12766 AC010501.1-201ENST00000606270 1962 ntBASIC40.8■■■■■ 4.12
HMGXB3Q12766 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC40.8■■■■■ 4.12
HMGXB3Q12766 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC40.8■■■■■ 4.12
HMGXB3Q12766 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC40.8■■■■■ 4.12
HMGXB3Q12766 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC40.79■■■■■ 4.12
HMGXB3Q12766 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC40.79■■■■■ 4.12
HMGXB3Q12766 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC40.79■■■■■ 4.12
HMGXB3Q12766 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC40.78■■■■■ 4.12
HMGXB3Q12766 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC40.78■■■■■ 4.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms