Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 TDA1YMR291W 1761 nt6.55□□□□□ -1.36
TY1B-JR1P47098 AIP1YMR092C 1848 nt6.54□□□□□ -1.36
TY1B-JR1P47098 OCA4YCR095C 1089 nt6.54□□□□□ -1.36
TY1B-JR1P47098 PER33YLR064W 822 nt6.54□□□□□ -1.36
TY1B-JR1P47098 CDC28YBR160W 897 nt6.54□□□□□ -1.36
TY1B-JR1P47098 KIN4YOR233W 2403 nt6.54□□□□□ -1.36
TY1B-JR1P47098 MSK1YNL073W 1731 nt6.54□□□□□ -1.36
TY1B-JR1P47098 HMX1YLR205C 954 nt6.54□□□□□ -1.36
TY1B-JR1P47098 YML116W-AYML116W-A 303 nt6.54□□□□□ -1.36
TY1B-JR1P47098 SWC3YAL011W 1878 nt6.54□□□□□ -1.36
TY1B-JR1P47098 FLO8YER109C 2400 nt6.53□□□□□ -1.36
TY1B-JR1P47098 NMD5YJR132W 3147 nt6.53□□□□□ -1.36
TY1B-JR1P47098 IMD2YHR216W 1572 nt6.53□□□□□ -1.36
TY1B-JR1P47098 SEC39YLR440C 2130 nt6.53□□□□□ -1.36
TY1B-JR1P47098 PDR10YOR328W 4695 nt6.53□□□□□ -1.36
TY1B-JR1P47098 VTC2YFL004W 2487 nt6.52□□□□□ -1.37
TY1B-JR1P47098 YDR246W-AYDR246W-A 201 nt6.52□□□□□ -1.37
TY1B-JR1P47098 YGL063C-AYGL063C-A 150 nt6.52□□□□□ -1.37
TY1B-JR1P47098 YHR173CYHR173C 339 nt6.52□□□□□ -1.37
TY1B-JR1P47098 RET3YPL010W 570 nt6.52□□□□□ -1.37
TY1B-JR1P47098 CYC8YBR112C 2901 nt6.52□□□□□ -1.37
TY1B-JR1P47098 YIL001WYIL001W 1542 nt6.52□□□□□ -1.37
TY1B-JR1P47098 AAD4YDL243C 990 nt6.52□□□□□ -1.37
TY1B-JR1P47098 tQ(UUG)CtQ(UUG)C 72 nt6.52□□□□□ -1.37
TY1B-JR1P47098 tQ(UUG)D1tQ(UUG)D1 72 nt6.52□□□□□ -1.37
TY1B-JR1P47098 tQ(UUG)D2tQ(UUG)D2 72 nt6.52□□□□□ -1.37
TY1B-JR1P47098 tQ(UUG)D3tQ(UUG)D3 72 nt6.52□□□□□ -1.37
TY1B-JR1P47098 tQ(UUG)E1tQ(UUG)E1 72 nt6.52□□□□□ -1.37
TY1B-JR1P47098 tQ(UUG)HtQ(UUG)H 72 nt6.52□□□□□ -1.37
TY1B-JR1P47098 tQ(UUG)LtQ(UUG)L 72 nt6.52□□□□□ -1.37
TY1B-JR1P47098 YHR182WYHR182W 2358 nt6.51□□□□□ -1.37
TY1B-JR1P47098 HIS4YCL030C 2400 nt6.51□□□□□ -1.37
TY1B-JR1P47098 RPL28YGL103W 450 nt6.5□□□□□ -1.37
TY1B-JR1P47098 VID27YNL212W 2349 nt6.5□□□□□ -1.37
TY1B-JR1P47098 ABZ1YNR033W 2364 nt6.5□□□□□ -1.37
TY1B-JR1P47098 FLD1YLR404W 858 nt6.49□□□□□ -1.37
TY1B-JR1P47098 RPL18BYNL301C 561 nt6.49□□□□□ -1.37
TY1B-JR1P47098 VPS68YOL129W 555 nt6.49□□□□□ -1.37
TY1B-JR1P47098 TIF34YMR146C 1044 nt6.48□□□□□ -1.37
TY1B-JR1P47098 MCM5YLR274W 2328 nt6.48□□□□□ -1.37
TY1B-JR1P47098 YTA12YMR089C 2478 nt6.48□□□□□ -1.37
TY1B-JR1P47098 UBX2YML013W 1755 nt6.47□□□□□ -1.37
TY1B-JR1P47098 DAN1YJR150C 897 nt6.46□□□□□ -1.37
TY1B-JR1P47098 MGS1YNL218W 1764 nt6.46□□□□□ -1.38
TY1B-JR1P47098 YHR032C-AYHR032C-A 120 nt6.46□□□□□ -1.38
TY1B-JR1P47098 LOH1YJL038C 660 nt6.46□□□□□ -1.38
TY1B-JR1P47098 RFA2YNL312W 822 nt6.46□□□□□ -1.38
TY1B-JR1P47098 BAT2YJR148W 1131 nt6.45□□□□□ -1.38
TY1B-JR1P47098 FBP1YLR377C 1047 nt6.45□□□□□ -1.38
TY1B-JR1P47098 NRD1YNL251C 1728 nt6.45□□□□□ -1.38
TY1B-JR1P47098 YGL072CYGL072C 360 nt6.44□□□□□ -1.38
TY1B-JR1P47098 GTT2YLL060C 702 nt6.44□□□□□ -1.38
TY1B-JR1P47098 SLX1YBR228W 915 nt6.44□□□□□ -1.38
TY1B-JR1P47098 ATF1YOR377W 1578 nt6.43□□□□□ -1.38
TY1B-JR1P47098 NAT2YGR147C 867 nt6.43□□□□□ -1.38
TY1B-JR1P47098 RAD16YBR114W 2373 nt6.43□□□□□ -1.38
TY1B-JR1P47098 CYM1YDR430C 2970 nt6.43□□□□□ -1.38
TY1B-JR1P47098 PDR18YNR070W 4002 nt6.42□□□□□ -1.38
TY1B-JR1P47098 YBR219CYBR219C 384 nt6.42□□□□□ -1.38
TY1B-JR1P47098 TAF5YBR198C 2397 nt6.42□□□□□ -1.38
TY1B-JR1P47098 YDR545C-AYDR545C-A 480 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YEL077W-AYEL077W-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YER190C-BYER190C-B 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YFL068WYFL068W 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YGR296C-BYGR296C-B 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YHL050W-AYHL050W-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YHR219C-AYHR219C-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YIL177W-AYIL177W-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 SGN1YIR001C 753 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YJL225W-AYJL225W-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YLL066W-AYLL066W-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YLL067W-AYLL067W-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YLR466C-AYLR466C-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YLR467C-AYLR467C-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YML133W-BYML133W-B 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 IMP1YMR150C 573 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YNL339W-BYNL339W-B 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YBL113W-AYBL113W-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YOR396C-AYOR396C-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YPL283W-BYPL283W-B 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 YPR204C-AYPR204C-A 483 nt6.41□□□□□ -1.38
TY1B-JR1P47098 HXK2YGL253W 1461 nt6.41□□□□□ -1.38
TY1B-JR1P47098 STE7YDL159W 1548 nt6.4□□□□□ -1.38
TY1B-JR1P47098 VAN1YML115C 1608 nt6.4□□□□□ -1.39
TY1B-JR1P47098 MSW1YDR268W 1140 nt6.39□□□□□ -1.39
TY1B-JR1P47098 YJR038CYJR038C 363 nt6.39□□□□□ -1.39
TY1B-JR1P47098 YKL023WYKL023W 834 nt6.39□□□□□ -1.39
TY1B-JR1P47098 BZZ1YHR114W 1902 nt6.39□□□□□ -1.39
TY1B-JR1P47098 NUP42YDR192C 1293 nt6.39□□□□□ -1.39
TY1B-JR1P47098 YAL047W-AYAL047W-A 330 nt6.39□□□□□ -1.39
TY1B-JR1P47098 YML031C-AYML031C-A 336 nt6.39□□□□□ -1.39
TY1B-JR1P47098 EOS1YNL080C 1101 nt6.39□□□□□ -1.39
TY1B-JR1P47098 SLA1YBL007C 3735 nt6.39□□□□□ -1.39
TY1B-JR1P47098 MAL11YGR289C 1851 nt6.38□□□□□ -1.39
TY1B-JR1P47098 HSP30YCR021C 999 nt6.38□□□□□ -1.39
TY1B-JR1P47098 VAS1YGR094W 3315 nt6.38□□□□□ -1.39
TY1B-JR1P47098 MNN2YBR015C 1794 nt6.37□□□□□ -1.39
TY1B-JR1P47098 YDR090CYDR090C 933 nt6.37□□□□□ -1.39
TY1B-JR1P47098 VPS69YPR087W 321 nt6.37□□□□□ -1.39
TY1B-JR1P47098 MET17YLR303W 1335 nt6.37□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 32.2 ms