Protein–RNA interactions for Protein: P43694

GATA4, Transcription factor GATA-4, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GATA4P43694 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GATA4P43694 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GATA4P43694 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GATA4P43694 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GATA4P43694 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GATA4P43694 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GATA4P43694 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GATA4P43694 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.21■□□□□ 0.67
GATA4P43694 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GATA4P43694 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GATA4P43694 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GATA4P43694 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GATA4P43694 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GATA4P43694 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GATA4P43694 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GATA4P43694 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GATA4P43694 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GATA4P43694 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GATA4P43694 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GATA4P43694 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GATA4P43694 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GATA4P43694 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GATA4P43694 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GATA4P43694 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.19■□□□□ 0.66
GATA4P43694 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GATA4P43694 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GATA4P43694 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.19■□□□□ 0.66
GATA4P43694 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.19■□□□□ 0.66
GATA4P43694 MIR3621-201ENST00000580529 85 ntBASIC19.19■□□□□ 0.66
GATA4P43694 AL117332.1-201ENST00000622628 974 ntBASIC19.19■□□□□ 0.66
GATA4P43694 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.19■□□□□ 0.66
GATA4P43694 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GATA4P43694 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GATA4P43694 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GATA4P43694 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.19■□□□□ 0.66
GATA4P43694 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GATA4P43694 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GATA4P43694 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GATA4P43694 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GATA4P43694 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GATA4P43694 AL356740.2-201ENST00000601559 647 ntBASIC19.18■□□□□ 0.66
GATA4P43694 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.18■□□□□ 0.66
GATA4P43694 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.18■□□□□ 0.66
GATA4P43694 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GATA4P43694 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GATA4P43694 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GATA4P43694 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GATA4P43694 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.18■□□□□ 0.66
GATA4P43694 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GATA4P43694 ABCB10P4-201ENST00000566803 2184 ntBASIC19.17■□□□□ 0.66
GATA4P43694 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GATA4P43694 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GATA4P43694 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GATA4P43694 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.17■□□□□ 0.66
GATA4P43694 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GATA4P43694 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GATA4P43694 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GATA4P43694 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.17■□□□□ 0.66
GATA4P43694 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GATA4P43694 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.16■□□□□ 0.66
GATA4P43694 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
GATA4P43694 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.16■□□□□ 0.66
GATA4P43694 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.16■□□□□ 0.66
GATA4P43694 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.16■□□□□ 0.66
GATA4P43694 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GATA4P43694 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GATA4P43694 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GATA4P43694 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GATA4P43694 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GATA4P43694 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GATA4P43694 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GATA4P43694 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GATA4P43694 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.15■□□□□ 0.66
GATA4P43694 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.15■□□□□ 0.66
GATA4P43694 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.15■□□□□ 0.66
GATA4P43694 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.15■□□□□ 0.66
GATA4P43694 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GATA4P43694 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GATA4P43694 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.15■□□□□ 0.66
GATA4P43694 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GATA4P43694 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.15■□□□□ 0.66
GATA4P43694 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GATA4P43694 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.14■□□□□ 0.65
GATA4P43694 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GATA4P43694 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.14■□□□□ 0.65
GATA4P43694 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GATA4P43694 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GATA4P43694 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
GATA4P43694 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GATA4P43694 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GATA4P43694 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
GATA4P43694 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.13■□□□□ 0.65
GATA4P43694 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GATA4P43694 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GATA4P43694 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GATA4P43694 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GATA4P43694 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.13■□□□□ 0.65
GATA4P43694 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GATA4P43694 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GATA4P43694 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms