Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 GDH2YDL215C 3279 nt4.37□□□□□ -1.71
RPL40BP0CH09 GUF1YLR289W 1938 nt4.37□□□□□ -1.71
RPL40BP0CH09 SHO1YER118C 1104 nt4.37□□□□□ -1.71
RPL40BP0CH09 YFR052C-AYFR052C-A 306 nt4.37□□□□□ -1.71
RPL40BP0CH09 NPY1YGL067W 1155 nt4.37□□□□□ -1.71
RPL40BP0CH09 UBI4YLL039C 1146 nt4.37□□□□□ -1.71
RPL40BP0CH09 SAP30YMR263W 606 nt4.37□□□□□ -1.71
RPL40BP0CH09 AST1YBL069W 1290 nt4.37□□□□□ -1.71
RPL40BP0CH09 RMI1YPL024W 726 nt4.37□□□□□ -1.71
RPL40BP0CH09 CRT10YOL063C 2874 nt4.37□□□□□ -1.71
RPL40BP0CH09 KRE6YPR159W 2163 nt4.37□□□□□ -1.71
RPL40BP0CH09 PDR10YOR328W 4695 nt4.37□□□□□ -1.71
RPL40BP0CH09 RSC2YLR357W 2670 nt4.36□□□□□ -1.71
RPL40BP0CH09 tC(GCA)BtC(GCA)B 72 nt4.36□□□□□ -1.71
RPL40BP0CH09 tC(GCA)GtC(GCA)G 72 nt4.36□□□□□ -1.71
RPL40BP0CH09 tC(GCA)P1tC(GCA)P1 72 nt4.36□□□□□ -1.71
RPL40BP0CH09 tC(GCA)P2tC(GCA)P2 72 nt4.36□□□□□ -1.71
RPL40BP0CH09 YER084WYER084W 387 nt4.36□□□□□ -1.71
RPL40BP0CH09 GRX4YER174C 735 nt4.36□□□□□ -1.71
RPL40BP0CH09 ZRT1YGL255W 1131 nt4.36□□□□□ -1.71
RPL40BP0CH09 MET31YPL038W 534 nt4.36□□□□□ -1.71
RPL40BP0CH09 MRI1YPR118W 1236 nt4.36□□□□□ -1.71
RPL40BP0CH09 RER1YCL001W 567 nt4.36□□□□□ -1.71
RPL40BP0CH09 MNT2YGL257C 1677 nt4.35□□□□□ -1.71
RPL40BP0CH09 PDR12YPL058C 4536 nt4.35□□□□□ -1.71
RPL40BP0CH09 CDC11YJR076C 1248 nt4.35□□□□□ -1.71
RPL40BP0CH09 SCW10YMR305C 1170 nt4.35□□□□□ -1.71
RPL40BP0CH09 PGM2YMR105C 1710 nt4.35□□□□□ -1.71
RPL40BP0CH09 CWC2YDL209C 1020 nt4.34□□□□□ -1.71
RPL40BP0CH09 RMR1YGL250W 726 nt4.34□□□□□ -1.71
RPL40BP0CH09 MBR1YKL093W 1020 nt4.34□□□□□ -1.71
RPL40BP0CH09 YOR379CYOR379C 339 nt4.34□□□□□ -1.71
RPL40BP0CH09 YCL012CYCL012C 405 nt4.34□□□□□ -1.71
RPL40BP0CH09 GSY1YFR015C 2127 nt4.34□□□□□ -1.71
RPL40BP0CH09 CEX1YOR112W 2286 nt4.34□□□□□ -1.72
RPL40BP0CH09 RAD53YPL153C 2466 nt4.34□□□□□ -1.72
RPL40BP0CH09 PXA1YPL147W 2613 nt4.34□□□□□ -1.72
RPL40BP0CH09 HIR2YOR038C 2628 nt4.33□□□□□ -1.72
RPL40BP0CH09 PEX29YDR479C 1665 nt4.33□□□□□ -1.72
RPL40BP0CH09 HST1YOL068C 1512 nt4.33□□□□□ -1.72
RPL40BP0CH09 PAN1YIR006C 4443 nt4.33□□□□□ -1.72
RPL40BP0CH09 LHP1YDL051W 828 nt4.33□□□□□ -1.72
RPL40BP0CH09 TEF4YKL081W 1239 nt4.33□□□□□ -1.72
RPL40BP0CH09 YMR245WYMR245W 621 nt4.33□□□□□ -1.72
RPL40BP0CH09 YBR053CYBR053C 1077 nt4.33□□□□□ -1.72
RPL40BP0CH09 MSN2YMR037C 2115 nt4.33□□□□□ -1.72
RPL40BP0CH09 FKH2YNL068C 2589 nt4.32□□□□□ -1.72
RPL40BP0CH09 YGR125WYGR125W 3111 nt4.32□□□□□ -1.72
RPL40BP0CH09 TRS23YDR246W 660 nt4.32□□□□□ -1.72
RPL40BP0CH09 YDR396WYDR396W 501 nt4.32□□□□□ -1.72
RPL40BP0CH09 PHM8YER037W 966 nt4.32□□□□□ -1.72
RPL40BP0CH09 RHO3YIL118W 696 nt4.32□□□□□ -1.72
RPL40BP0CH09 ISY1YJR050W 708 nt4.32□□□□□ -1.72
RPL40BP0CH09 KTI12YKL110C 942 nt4.32□□□□□ -1.72
RPL40BP0CH09 COG5YNL051W 1212 nt4.32□□□□□ -1.72
RPL40BP0CH09 IMA1YGR287C 1770 nt4.32□□□□□ -1.72
RPL40BP0CH09 STE20YHL007C 2820 nt4.31□□□□□ -1.72
RPL40BP0CH09 YDR417CYDR417C 372 nt4.31□□□□□ -1.72
RPL40BP0CH09 YEL067CYEL067C 588 nt4.31□□□□□ -1.72
RPL40BP0CH09 FRA2YGL220W 363 nt4.31□□□□□ -1.72
RPL40BP0CH09 SOD1YJR104C 465 nt4.31□□□□□ -1.72
RPL40BP0CH09 YJR112W-AYJR112W-A 330 nt4.31□□□□□ -1.72
RPL40BP0CH09 YBR226CYBR226C 411 nt4.31□□□□□ -1.72
RPL40BP0CH09 PAP1YKR002W 1707 nt4.3□□□□□ -1.72
RPL40BP0CH09 ZUO1YGR285C 1302 nt4.3□□□□□ -1.72
RPL40BP0CH09 AIM7YDR063W 450 nt4.3□□□□□ -1.72
RPL40BP0CH09 OTU1YFL044C 906 nt4.3□□□□□ -1.72
RPL40BP0CH09 KIN2YLR096W 3444 nt4.3□□□□□ -1.72
RPL40BP0CH09 FUI1YBL042C 1920 nt4.3□□□□□ -1.72
RPL40BP0CH09 MMT2YPL224C 1455 nt4.3□□□□□ -1.72
RPL40BP0CH09 GCN20YFR009W 2259 nt4.29□□□□□ -1.72
RPL40BP0CH09 AHA1YDR214W 1053 nt4.29□□□□□ -1.72
RPL40BP0CH09 TRX2YGR209C 315 nt4.29□□□□□ -1.72
RPL40BP0CH09 MDG1YNL173C 1101 nt4.29□□□□□ -1.72
RPL40BP0CH09 SFT2YBL102W 648 nt4.29□□□□□ -1.72
RPL40BP0CH09 YPR169W-AYPR169W-A 219 nt4.29□□□□□ -1.72
RPL40BP0CH09 YPR170W-BYPR170W-B 258 nt4.29□□□□□ -1.72
RPL40BP0CH09 CIT3YPR001W 1461 nt4.29□□□□□ -1.72
RPL40BP0CH09 YGL185CYGL185C 1140 nt4.28□□□□□ -1.72
RPL40BP0CH09 ADE3YGR204W 2841 nt4.28□□□□□ -1.72
RPL40BP0CH09 YFL052WYFL052W 1398 nt4.27□□□□□ -1.73
RPL40BP0CH09 YEL045CYEL045C 426 nt4.27□□□□□ -1.73
RPL40BP0CH09 YEL057CYEL057C 702 nt4.27□□□□□ -1.73
RPL40BP0CH09 CNN1YFR046C 1086 nt4.27□□□□□ -1.73
RPL40BP0CH09 ECT1YGR007W 972 nt4.27□□□□□ -1.73
RPL40BP0CH09 YJR085CYJR085C 318 nt4.27□□□□□ -1.73
RPL40BP0CH09 ENV9YOR246C 993 nt4.27□□□□□ -1.73
RPL40BP0CH09 MPS3YJL019W 2049 nt4.27□□□□□ -1.73
RPL40BP0CH09 NUP1YOR098C 3231 nt4.27□□□□□ -1.73
RPL40BP0CH09 CHL4YDR254W 1377 nt4.27□□□□□ -1.73
RPL40BP0CH09 CHS5YLR330W 2016 nt4.26□□□□□ -1.73
RPL40BP0CH09 AIP1YMR092C 1848 nt4.26□□□□□ -1.73
RPL40BP0CH09 YDL012CYDL012C 324 nt4.26□□□□□ -1.73
RPL40BP0CH09 NUP42YDR192C 1293 nt4.26□□□□□ -1.73
RPL40BP0CH09 THI5YFL058W 1023 nt4.26□□□□□ -1.73
RPL40BP0CH09 MCM1YMR043W 861 nt4.26□□□□□ -1.73
RPL40BP0CH09 YNL108CYNL108C 813 nt4.26□□□□□ -1.73
RPL40BP0CH09 THI12YNL332W 1023 nt4.26□□□□□ -1.73
RPL40BP0CH09 TLG2YOL018C 1194 nt4.26□□□□□ -1.73
RPL40BP0CH09 CDC21YOR074C 915 nt4.26□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms