Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.84■□□□□ 0.77
LCATP04180 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LCATP04180 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.83■□□□□ 0.77
LCATP04180 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.83■□□□□ 0.77
LCATP04180 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.83■□□□□ 0.77
LCATP04180 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LCATP04180 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.83■□□□□ 0.76
LCATP04180 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LCATP04180 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LCATP04180 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.82■□□□□ 0.76
LCATP04180 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.82■□□□□ 0.76
LCATP04180 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LCATP04180 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LCATP04180 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.82■□□□□ 0.76
LCATP04180 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
LCATP04180 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LCATP04180 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LCATP04180 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.81■□□□□ 0.76
LCATP04180 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LCATP04180 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LCATP04180 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LCATP04180 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.81■□□□□ 0.76
LCATP04180 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 ALDH1A3-203ENST00000557963 1670 ntBASIC19.81■□□□□ 0.76
LCATP04180 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.81■□□□□ 0.76
LCATP04180 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCATP04180 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LCATP04180 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCATP04180 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCATP04180 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCATP04180 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.8■□□□□ 0.76
LCATP04180 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LCATP04180 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LCATP04180 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.8■□□□□ 0.76
LCATP04180 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.79■□□□□ 0.76
LCATP04180 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
LCATP04180 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCATP04180 AC004448.1-201ENST00000458332 883 ntBASIC19.79■□□□□ 0.76
LCATP04180 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
LCATP04180 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.79■□□□□ 0.76
LCATP04180 AC137630.3-201ENST00000607245 391 ntBASIC19.79■□□□□ 0.76
LCATP04180 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LCATP04180 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LCATP04180 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LCATP04180 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.79■□□□□ 0.76
LCATP04180 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.79■□□□□ 0.76
LCATP04180 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LCATP04180 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.79■□□□□ 0.76
LCATP04180 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LCATP04180 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LCATP04180 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.78■□□□□ 0.76
LCATP04180 RARRES2P1-201ENST00000474487 481 ntBASIC19.78■□□□□ 0.76
LCATP04180 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.78■□□□□ 0.76
LCATP04180 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.78■□□□□ 0.76
LCATP04180 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.78■□□□□ 0.76
LCATP04180 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LCATP04180 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCATP04180 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LCATP04180 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCATP04180 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.77■□□□□ 0.76
LCATP04180 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCATP04180 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LCATP04180 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LCATP04180 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LCATP04180 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCATP04180 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LCATP04180 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCATP04180 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LCATP04180 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.76■□□□□ 0.75
LCATP04180 BX664725.1-201ENST00000438252 379 ntBASIC19.76■□□□□ 0.75
LCATP04180 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.76■□□□□ 0.75
LCATP04180 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LCATP04180 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms