Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.31■□□□□ 0.84
CLDN1O95832 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN1O95832 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN1O95832 DUX4L2-201ENST00000561772 1275 ntBASIC20.31■□□□□ 0.84
CLDN1O95832 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
CLDN1O95832 DUX4L6-201ENST00000626483 1275 ntBASIC20.31■□□□□ 0.84
CLDN1O95832 DUX4L1-201ENST00000627662 1275 ntBASIC20.31■□□□□ 0.84
CLDN1O95832 DUX4L8-201ENST00000629013 1275 ntBASIC20.31■□□□□ 0.84
CLDN1O95832 DUX4L3-201ENST00000630187 1275 ntBASIC20.31■□□□□ 0.84
CLDN1O95832 DUX4L7-201ENST00000630678 1275 ntBASIC20.31■□□□□ 0.84
CLDN1O95832 DUX4L5-201ENST00000630834 1275 ntBASIC20.31■□□□□ 0.84
CLDN1O95832 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN1O95832 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN1O95832 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN1O95832 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN1O95832 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN1O95832 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN1O95832 YBX1P1-201ENST00000445822 960 ntBASIC20.3■□□□□ 0.84
CLDN1O95832 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN1O95832 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN1O95832 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN1O95832 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN1O95832 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN1O95832 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLDN1O95832 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN1O95832 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.29■□□□□ 0.84
CLDN1O95832 AP004609.3-201ENST00000610705 1884 ntBASIC20.29■□□□□ 0.84
CLDN1O95832 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN1O95832 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN1O95832 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN1O95832 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN1O95832 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN1O95832 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN1O95832 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN1O95832 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.28■□□□□ 0.84
CLDN1O95832 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CLDN1O95832 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN1O95832 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CLDN1O95832 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN1O95832 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLDN1O95832 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN1O95832 HLA-L-209ENST00000420110 1011 ntBASIC20.27■□□□□ 0.84
CLDN1O95832 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.27■□□□□ 0.84
CLDN1O95832 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN1O95832 AC233992.3-201ENST00000607491 485 ntBASIC20.27■□□□□ 0.84
CLDN1O95832 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN1O95832 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN1O95832 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN1O95832 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN1O95832 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN1O95832 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN1O95832 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN1O95832 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN1O95832 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN1O95832 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN1O95832 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLDN1O95832 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.26■□□□□ 0.83
CLDN1O95832 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN1O95832 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN1O95832 AC145676.1-201ENST00000514988 2004 ntBASIC20.26■□□□□ 0.83
CLDN1O95832 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN1O95832 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN1O95832 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN1O95832 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
CLDN1O95832 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CLDN1O95832 AC136469.2-201ENST00000623944 1028 ntBASIC20.25■□□□□ 0.83
CLDN1O95832 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CLDN1O95832 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN1O95832 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN1O95832 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN1O95832 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLDN1O95832 ESRRAP2-201ENST00000418437 1549 ntBASIC20.24■□□□□ 0.83
CLDN1O95832 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.24■□□□□ 0.83
CLDN1O95832 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLDN1O95832 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN1O95832 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN1O95832 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN1O95832 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN1O95832 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLDN1O95832 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN1O95832 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms