Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA1O95477 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA1O95477 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA1O95477 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA1O95477 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.02■□□□□ 0.64
ABCA1O95477 IKBKGP1-201ENST00000612193 1073 ntBASIC19.02■□□□□ 0.64
ABCA1O95477 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.02■□□□□ 0.64
ABCA1O95477 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA1O95477 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ABCA1O95477 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA1O95477 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA1O95477 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA1O95477 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.02■□□□□ 0.63
ABCA1O95477 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA1O95477 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
ABCA1O95477 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ABCA1O95477 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA1O95477 AC010501.1-201ENST00000606270 1962 ntBASIC19.01■□□□□ 0.63
ABCA1O95477 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
ABCA1O95477 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA1O95477 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCA1O95477 AC135731.1-201ENST00000569415 2548 ntBASIC19.01■□□□□ 0.63
ABCA1O95477 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA1O95477 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.01■□□□□ 0.63
ABCA1O95477 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA1O95477 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCA1O95477 RARRES2P11-201ENST00000635158 484 ntBASIC19■□□□□ 0.63
ABCA1O95477 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA1O95477 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA1O95477 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCA1O95477 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19■□□□□ 0.63
ABCA1O95477 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA1O95477 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ABCA1O95477 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCA1O95477 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.99■□□□□ 0.63
ABCA1O95477 AC099791.2-201ENST00000605725 427 ntBASIC18.99■□□□□ 0.63
ABCA1O95477 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCA1O95477 AC009102.2-201ENST00000606772 1639 ntBASIC18.99■□□□□ 0.63
ABCA1O95477 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCA1O95477 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCA1O95477 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCA1O95477 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCA1O95477 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCA1O95477 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ABCA1O95477 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCA1O95477 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCA1O95477 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCA1O95477 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCA1O95477 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ABCA1O95477 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ABCA1O95477 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ABCA1O95477 C17orf82-201ENST00000623772 1530 ntBASIC18.97■□□□□ 0.63
ABCA1O95477 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.97■□□□□ 0.63
ABCA1O95477 AC099791.1-201ENST00000416440 715 ntBASIC18.97■□□□□ 0.63
ABCA1O95477 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.97■□□□□ 0.63
ABCA1O95477 AC022517.1-201ENST00000592429 346 ntBASIC18.97■□□□□ 0.63
ABCA1O95477 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ABCA1O95477 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ABCA1O95477 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ABCA1O95477 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ABCA1O95477 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ABCA1O95477 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ABCA1O95477 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.96■□□□□ 0.63
ABCA1O95477 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ABCA1O95477 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ABCA1O95477 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.96■□□□□ 0.63
ABCA1O95477 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ABCA1O95477 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
ABCA1O95477 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ABCA1O95477 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
ABCA1O95477 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA1O95477 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.95■□□□□ 0.62
ABCA1O95477 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ABCA1O95477 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.95■□□□□ 0.62
ABCA1O95477 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA1O95477 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.95■□□□□ 0.62
ABCA1O95477 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA1O95477 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCA1O95477 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCA1O95477 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA1O95477 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCA1O95477 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.95■□□□□ 0.62
ABCA1O95477 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA1O95477 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA1O95477 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ABCA1O95477 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA1O95477 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCA1O95477 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA1O95477 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA1O95477 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ABCA1O95477 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA1O95477 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ABCA1O95477 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ABCA1O95477 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ABCA1O95477 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCA1O95477 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms