Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.06■■□□□ 1.92
TMEM88BA6NKF7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.06■■□□□ 1.92
TMEM88BA6NKF7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.06■■□□□ 1.92
TMEM88BA6NKF7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.05■■□□□ 1.92
TMEM88BA6NKF7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.05■■□□□ 1.92
TMEM88BA6NKF7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
TMEM88BA6NKF7 AC016769.1-201ENST00000409132 1010 ntBASIC27.05■■□□□ 1.92
TMEM88BA6NKF7 CD99P1-205ENST00000527459 561 ntBASIC27.05■■□□□ 1.92
TMEM88BA6NKF7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.05■■□□□ 1.92
TMEM88BA6NKF7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.05■■□□□ 1.92
TMEM88BA6NKF7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.04■■□□□ 1.92
TMEM88BA6NKF7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.03■■□□□ 1.92
TMEM88BA6NKF7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
TMEM88BA6NKF7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TMEM88BA6NKF7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.03■■□□□ 1.92
TMEM88BA6NKF7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 AC006970.2-201ENST00000450065 779 ntBASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 pRNA.6-201ENST00000610482 90 ntBASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 pRNA.5-201ENST00000612139 90 ntBASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 pRNA.11-201ENST00000618423 90 ntBASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 pRNA.13-201ENST00000619112 90 ntBASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.02■■□□□ 1.92
TMEM88BA6NKF7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
TMEM88BA6NKF7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.01■■□□□ 1.92
TMEM88BA6NKF7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC27.01■■□□□ 1.91
TMEM88BA6NKF7 TSPY20P-201ENST00000450910 630 ntBASIC27.01■■□□□ 1.91
TMEM88BA6NKF7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
TMEM88BA6NKF7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TMEM88BA6NKF7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC27■■□□□ 1.91
TMEM88BA6NKF7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27■■□□□ 1.91
TMEM88BA6NKF7 AC137761.2-201ENST00000561729 223 ntBASIC27■■□□□ 1.91
TMEM88BA6NKF7 AC145350.3-201ENST00000569033 163 ntBASIC27■■□□□ 1.91
TMEM88BA6NKF7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27■■□□□ 1.91
TMEM88BA6NKF7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TMEM88BA6NKF7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 AC131274.2-201ENST00000580697 1507 ntBASIC26.99■■□□□ 1.91
TMEM88BA6NKF7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.98■■□□□ 1.91
TMEM88BA6NKF7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TMEM88BA6NKF7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TMEM88BA6NKF7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TMEM88BA6NKF7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TMEM88BA6NKF7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.98■■□□□ 1.91
TMEM88BA6NKF7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
TMEM88BA6NKF7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.96■■□□□ 1.91
TMEM88BA6NKF7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TMEM88BA6NKF7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TMEM88BA6NKF7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TMEM88BA6NKF7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TMEM88BA6NKF7 NCF1B-203ENST00000435988 1254 ntBASIC26.95■■□□□ 1.9
TMEM88BA6NKF7 CROCCP5-201ENST00000436658 830 ntBASIC26.95■■□□□ 1.9
TMEM88BA6NKF7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.95■■□□□ 1.9
TMEM88BA6NKF7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
TMEM88BA6NKF7 AL499627.2-201ENST00000606283 725 ntBASIC26.95■■□□□ 1.9
TMEM88BA6NKF7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.94■■□□□ 1.9
TMEM88BA6NKF7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.93■■□□□ 1.9
TMEM88BA6NKF7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.93■■□□□ 1.9
TMEM88BA6NKF7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TMEM88BA6NKF7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TMEM88BA6NKF7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.93■■□□□ 1.9
TMEM88BA6NKF7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
TMEM88BA6NKF7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms