Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PNMA6EA0A0J9YXQ4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PNMA6EA0A0J9YXQ4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
PNMA6EA0A0J9YXQ4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.42■■■□□ 2.14
PNMA6EA0A0J9YXQ4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.42■■■□□ 2.14
PNMA6EA0A0J9YXQ4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PNMA6EA0A0J9YXQ4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.42■■■□□ 2.14
PNMA6EA0A0J9YXQ4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 MIR6724-1-201ENST00000616420 92 ntBASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 MIR6724-2-201ENST00000616483 92 ntBASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 MIR6724-4-201ENST00000617390 92 ntBASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 MIR6724-3-201ENST00000622482 92 ntBASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
PNMA6EA0A0J9YXQ4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PNMA6EA0A0J9YXQ4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PNMA6EA0A0J9YXQ4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PNMA6EA0A0J9YXQ4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PNMA6EA0A0J9YXQ4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.4■■■□□ 2.14
PNMA6EA0A0J9YXQ4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PNMA6EA0A0J9YXQ4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
PNMA6EA0A0J9YXQ4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PNMA6EA0A0J9YXQ4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.39■■■□□ 2.14
PNMA6EA0A0J9YXQ4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
PNMA6EA0A0J9YXQ4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PNMA6EA0A0J9YXQ4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
PNMA6EA0A0J9YXQ4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PNMA6EA0A0J9YXQ4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PNMA6EA0A0J9YXQ4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.37■■■□□ 2.13
PNMA6EA0A0J9YXQ4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.36■■■□□ 2.13
PNMA6EA0A0J9YXQ4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
PNMA6EA0A0J9YXQ4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PNMA6EA0A0J9YXQ4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.35■■■□□ 2.13
PNMA6EA0A0J9YXQ4 AL117332.1-201ENST00000622628 974 ntBASIC28.35■■■□□ 2.13
PNMA6EA0A0J9YXQ4 AC005703.6-201ENST00000623265 1329 ntBASIC28.35■■■□□ 2.13
PNMA6EA0A0J9YXQ4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PNMA6EA0A0J9YXQ4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PNMA6EA0A0J9YXQ4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PNMA6EA0A0J9YXQ4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.34■■■□□ 2.13
PNMA6EA0A0J9YXQ4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.34■■■□□ 2.13
PNMA6EA0A0J9YXQ4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
PNMA6EA0A0J9YXQ4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.34■■■□□ 2.13
PNMA6EA0A0J9YXQ4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PNMA6EA0A0J9YXQ4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PNMA6EA0A0J9YXQ4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
PNMA6EA0A0J9YXQ4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PNMA6EA0A0J9YXQ4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PNMA6EA0A0J9YXQ4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.33■■■□□ 2.13
PNMA6EA0A0J9YXQ4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PNMA6EA0A0J9YXQ4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
PNMA6EA0A0J9YXQ4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
PNMA6EA0A0J9YXQ4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6EA0A0J9YXQ4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.31■■■□□ 2.12
PNMA6EA0A0J9YXQ4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PNMA6EA0A0J9YXQ4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PNMA6EA0A0J9YXQ4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PNMA6EA0A0J9YXQ4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 MIR3621-201ENST00000580529 85 ntBASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms