Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 AC009831.1-201ENST00000580420 1582 ntBASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 AC133552.2-201ENST00000619106 1032 ntBASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV5A0A0B4J249 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 GPX1-201ENST00000419349 1106 ntBASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV5A0A0B4J249 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV5A0A0B4J249 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 RPS2P7-201ENST00000447334 885 ntBASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV5A0A0B4J249 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV5A0A0B4J249 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV5A0A0B4J249 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV5A0A0B4J249 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV5A0A0B4J249 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV5A0A0B4J249 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV5A0A0B4J249 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV5A0A0B4J249 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV5A0A0B4J249 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV5A0A0B4J249 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV5A0A0B4J249 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV5A0A0B4J249 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV5A0A0B4J249 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAV5A0A0B4J249 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms