Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 U73169.1-201ENST00000395152 367 ntBASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 ZNF877P-201ENST00000437614 612 ntBASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 AC079414.2-201ENST00000567157 1104 ntBASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 MIR4640-201ENST00000581824 90 ntBASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 AC005746.3-201ENST00000614751 393 ntBASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 POR-201ENST00000394893 2532 ntTSL 5 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
HECTD4Q9Y4D8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 RPS23-207ENST00000511844 530 ntTSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 MIR2278-201ENST00000516344 96 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC104506.1-201ENST00000609247 429 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC097359.2-201ENST00000604992 2389 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC015688.4-201ENST00000580780 1647 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC004923.3-201ENST00000527532 355 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC023968.2-201ENST00000560593 1049 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC091304.3-201ENST00000566500 716 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 ALG1L15P-201ENST00000482834 794 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 KLF17P1-201ENST00000547105 1126 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HECTD4Q9Y4D8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC9.33□□□□□ -0.92
HECTD4Q9Y4D8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HECTD4Q9Y4D8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms