Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 AC011700.1-201ENST00000610409 2627 ntBASIC14.53□□□□□ -0.08
MKS1Q9NXB0 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MKS1Q9NXB0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 POM121L8P-201ENST00000417732 1281 ntBASIC14.52□□□□□ -0.09
MKS1Q9NXB0 AC245100.3-201ENST00000441281 285 ntBASIC14.52□□□□□ -0.09
MKS1Q9NXB0 POM121L9P-203ENST00000441984 1285 ntBASIC14.52□□□□□ -0.09
MKS1Q9NXB0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 KRT18P25-201ENST00000508931 1278 ntBASIC14.52□□□□□ -0.09
MKS1Q9NXB0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 AC092552.1-201ENST00000547243 906 ntBASIC14.52□□□□□ -0.09
MKS1Q9NXB0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.52□□□□□ -0.09
MKS1Q9NXB0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 SLC7A15P-201ENST00000424028 1363 ntBASIC14.51□□□□□ -0.09
MKS1Q9NXB0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 DUX4L27-201ENST00000554796 1261 ntBASIC14.51□□□□□ -0.09
MKS1Q9NXB0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 AC005586.2-201ENST00000563946 837 ntBASIC14.51□□□□□ -0.09
MKS1Q9NXB0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms