Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH11XQ9BZA7 GNG10P1-201ENST00000452289 199 ntBASIC18.74■□□□□ 0.59
PCDH11XQ9BZA7 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH11XQ9BZA7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDH11XQ9BZA7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDH11XQ9BZA7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH11XQ9BZA7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH11XQ9BZA7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 CTBP2P8-201ENST00000422584 1330 ntBASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AC006987.1-201ENST00000413610 527 ntBASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 RN7SL767P-201ENST00000493013 295 ntBASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AL021707.6-201ENST00000609212 491 ntBASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AC002472.4-201ENST00000641915 272 ntBASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AGAP7P-201ENST00000582299 2062 ntBASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 AGAP14-201ENST00000624701 2060 ntBASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH11XQ9BZA7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 PAUPAR-201ENST00000630360 2965 ntBASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 ACTG1P19-201ENST00000418987 1116 ntBASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 PGAM1P12-201ENST00000505622 748 ntBASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 KRT8P2-201ENST00000556193 944 ntBASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH11XQ9BZA7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 CCT8L1P-201ENST00000465400 1674 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms