Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
VPS8Q8N3P4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
VPS8Q8N3P4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 RPL8P2-201ENST00000430538 502 ntBASIC22.57■■□□□ 1.2
VPS8Q8N3P4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 CICP16-201ENST00000502609 2813 ntBASIC22.57■■□□□ 1.2
VPS8Q8N3P4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 AP000358.1-201ENST00000456260 156 ntBASIC22.57■■□□□ 1.2
VPS8Q8N3P4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS8Q8N3P4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 GOLGA8VP-201ENST00000559009 1798 ntBASIC22.56■■□□□ 1.2
VPS8Q8N3P4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 AC114947.1-202ENST00000514136 344 ntBASIC22.56■■□□□ 1.2
VPS8Q8N3P4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS8Q8N3P4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC067931.2-201ENST00000623655 2003 ntBASIC22.55■■□□□ 1.2
VPS8Q8N3P4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 KRT17P5-201ENST00000332088 839 ntBASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AL583805.1-201ENST00000391389 531 ntBASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC026320.2-201ENST00000434379 478 ntBASIC22.55■■□□□ 1.2
VPS8Q8N3P4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC019193.1-201ENST00000506678 823 ntBASIC22.55■■□□□ 1.2
VPS8Q8N3P4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 AC138894.2-201ENST00000602838 371 ntBASIC22.55■■□□□ 1.2
VPS8Q8N3P4 YRDCP1-201ENST00000621419 643 ntBASIC22.55■■□□□ 1.2
VPS8Q8N3P4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS8Q8N3P4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms