Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 KRT8P29-201ENST00000420409 1371 ntBASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 AL161773.1-201ENST00000624845 863 ntBASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 AC138466.4-201ENST00000623965 852 ntBASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 Z98259.2-201ENST00000641583 609 ntBASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RP1L1Q8IWN7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 AL627231.1-201ENST00000394467 1125 ntBASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 AC092638.2-201ENST00000441105 947 ntBASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 AC107464.3-201ENST00000609172 737 ntBASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 MIR6769A-201ENST00000617340 73 ntBASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 KRT18P9-201ENST00000604826 1300 ntBASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 ISCA2P1-201ENST00000425548 448 ntBASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 AC012441.2-201ENST00000444843 739 ntBASIC13.37□□□□□ -0.27
RP1L1Q8IWN7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms