Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 AP001002.3-201ENST00000623482 206 ntBASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 AC007326.2-201ENST00000624224 7579 ntBASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TUBB1P2-201ENST00000422712 1306 ntBASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TUBB1P1-201ENST00000503144 1300 ntBASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD3Q7Z3D4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 MIR600HG-201ENST00000449175 5984 ntBASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 AC022447.6-201ENST00000515522 438 ntBASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 EEF1DP1-201ENST00000585891 896 ntBASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD3Q7Z3D4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 RPL13AP20-201ENST00000459725 609 ntBASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AC100850.1-201ENST00000506768 649 ntBASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD3Q7Z3D4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms