Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC27Q2M243 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC27Q2M243 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 AC068587.6-202ENST00000641839 5619 ntBASIC19.02■□□□□ 0.64
CCDC27Q2M243 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 AC022217.1-201ENST00000521069 738 ntBASIC19.02■□□□□ 0.64
CCDC27Q2M243 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 AC090386.2-201ENST00000623010 1039 ntBASIC19.02■□□□□ 0.64
CCDC27Q2M243 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC27Q2M243 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC27Q2M243 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC27Q2M243 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC27Q2M243 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC27Q2M243 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC27Q2M243 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC27Q2M243 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CCDC27Q2M243 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CCDC27Q2M243 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC27Q2M243 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 AHCYP4-201ENST00000419201 1315 ntBASIC19.01■□□□□ 0.63
CCDC27Q2M243 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 OR2R1P-201ENST00000441404 914 ntBASIC19.01■□□□□ 0.63
CCDC27Q2M243 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 PFN1P12-201ENST00000455938 534 ntBASIC19.01■□□□□ 0.63
CCDC27Q2M243 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 PGAM1P5-201ENST00000548011 764 ntBASIC19.01■□□□□ 0.63
CCDC27Q2M243 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 RN7SL163P-201ENST00000583100 276 ntBASIC19.01■□□□□ 0.63
CCDC27Q2M243 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 LAP3P2-201ENST00000454686 1454 ntBASIC19.01■□□□□ 0.63
CCDC27Q2M243 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC27Q2M243 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC27Q2M243 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC27Q2M243 AC139749.1-202ENST00000617529 3139 ntBASIC19■□□□□ 0.63
CCDC27Q2M243 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC27Q2M243 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC27Q2M243 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCDC27Q2M243 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms