Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RPP21-221ENST00000428040 594 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 MKNK2P1-201ENST00000437526 628 ntBASIC10.47□□□□□ -0.73
RPL39P62891 CEND1P1-201ENST00000451006 455 ntBASIC10.47□□□□□ -0.73
RPL39P62891 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.47□□□□□ -0.73
RPL39P62891 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.47□□□□□ -0.73
RPL39P62891 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.47□□□□□ -0.73
RPL39P62891 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.47□□□□□ -0.73
RPL39P62891 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC10.47□□□□□ -0.73
RPL39P62891 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.47□□□□□ -0.73
RPL39P62891 AC093520.2-201ENST00000561830 333 ntBASIC10.47□□□□□ -0.73
RPL39P62891 AC040169.1-201ENST00000565382 521 ntBASIC10.47□□□□□ -0.73
RPL39P62891 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.47□□□□□ -0.73
RPL39P62891 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.47□□□□□ -0.73
RPL39P62891 AL109936.8-201ENST00000641772 604 ntBASIC10.47□□□□□ -0.73
RPL39P62891 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 AL157996.1-201ENST00000624684 2299 ntBASIC10.47□□□□□ -0.73
RPL39P62891 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RPL39P62891 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RPL39P62891 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RPL39P62891 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RPL39P62891 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RPL39P62891 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RPL39P62891 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RPL39P62891 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 RPL37AP1-201ENST00000412502 279 ntBASIC10.46□□□□□ -0.73
RPL39P62891 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.46□□□□□ -0.73
RPL39P62891 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.46□□□□□ -0.73
RPL39P62891 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RPL39P62891 AC120114.3-201ENST00000611923 658 ntBASIC10.46□□□□□ -0.73
RPL39P62891 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.46□□□□□ -0.73
RPL39P62891 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.46□□□□□ -0.73
RPL39P62891 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.46□□□□□ -0.73
RPL39P62891 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
RPL39P62891 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
RPL39P62891 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
RPL39P62891 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.46□□□□□ -0.74
RPL39P62891 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
RPL39P62891 AC011840.2-201ENST00000563063 1520 ntBASIC10.46□□□□□ -0.74
RPL39P62891 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.46□□□□□ -0.74
RPL39P62891 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
RPL39P62891 ELL2P1-201ENST00000413990 1906 ntBASIC10.46□□□□□ -0.74
RPL39P62891 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.46□□□□□ -0.74
RPL39P62891 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.46□□□□□ -0.74
RPL39P62891 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms