Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.97□□□□□ -0.65
CMC4P56277 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 AL008707.1-201ENST00000422498 534 ntBASIC10.97□□□□□ -0.65
CMC4P56277 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 CICP12-201ENST00000455801 843 ntBASIC10.97□□□□□ -0.65
CMC4P56277 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC10.97□□□□□ -0.65
CMC4P56277 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 AC106794.1-201ENST00000506935 792 ntBASIC10.97□□□□□ -0.65
CMC4P56277 AGER-214ENST00000538695 487 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC10.97□□□□□ -0.65
CMC4P56277 RBM8B-201ENST00000555532 525 ntBASIC10.97□□□□□ -0.65
CMC4P56277 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 RN7SL219P-201ENST00000582872 296 ntBASIC10.97□□□□□ -0.65
CMC4P56277 DRG2-220ENST00000583355 891 ntTSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 MIR4259-201ENST00000584466 101 ntBASIC10.97□□□□□ -0.65
CMC4P56277 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC10.97□□□□□ -0.65
CMC4P56277 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.97□□□□□ -0.65
CMC4P56277 INE2-201ENST00000630399 1874 ntBASIC10.97□□□□□ -0.65
CMC4P56277 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.97□□□□□ -0.65
CMC4P56277 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
CMC4P56277 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CMC4P56277 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC10.96□□□□□ -0.65
CMC4P56277 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC10.96□□□□□ -0.65
CMC4P56277 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 AGGF1P1-201ENST00000509500 2073 ntBASIC10.96□□□□□ -0.65
CMC4P56277 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.96□□□□□ -0.65
CMC4P56277 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.96□□□□□ -0.65
CMC4P56277 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.96□□□□□ -0.65
CMC4P56277 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC10.96□□□□□ -0.65
CMC4P56277 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC10.96□□□□□ -0.65
CMC4P56277 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC10.96□□□□□ -0.65
CMC4P56277 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.96□□□□□ -0.65
CMC4P56277 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC10.96□□□□□ -0.65
CMC4P56277 RPL13AP20-201ENST00000459725 609 ntBASIC10.96□□□□□ -0.65
CMC4P56277 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC10.96□□□□□ -0.65
CMC4P56277 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.96□□□□□ -0.65
CMC4P56277 AC022447.6-201ENST00000515522 438 ntBASIC10.96□□□□□ -0.65
CMC4P56277 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC10.96□□□□□ -0.65
CMC4P56277 AP003171.2-201ENST00000528208 925 ntBASIC10.96□□□□□ -0.65
CMC4P56277 AC027237.1-201ENST00000560942 655 ntBASIC10.96□□□□□ -0.65
CMC4P56277 AC005586.2-201ENST00000563946 837 ntBASIC10.96□□□□□ -0.65
CMC4P56277 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.96□□□□□ -0.65
CMC4P56277 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 RN7SL163P-201ENST00000583100 276 ntBASIC10.96□□□□□ -0.65
CMC4P56277 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 AC132192.2-201ENST00000596206 1147 ntBASIC10.96□□□□□ -0.65
CMC4P56277 AP000346.4-201ENST00000614827 381 ntBASIC10.96□□□□□ -0.65
CMC4P56277 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC10.96□□□□□ -0.65
CMC4P56277 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CMC4P56277 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
CMC4P56277 FUK-207ENST00000571514 3054 ntTSL 2 BASIC10.96□□□□□ -0.66
CMC4P56277 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CMC4P56277 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
CMC4P56277 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CMC4P56277 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CMC4P56277 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.96□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms