Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RNF144AP50876 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 AL354702.1-201ENST00000442006 1960 ntBASIC13.8□□□□□ -0.2
RNF144AP50876 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 ACTG1P3-201ENST00000431775 1114 ntBASIC13.79□□□□□ -0.2
RNF144AP50876 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.79□□□□□ -0.2
RNF144AP50876 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RNF144AP50876 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.79□□□□□ -0.2
RNF144AP50876 LINC02084-201ENST00000606069 1096 ntBASIC13.79□□□□□ -0.2
RNF144AP50876 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF144AP50876 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF144AP50876 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 AC011840.2-201ENST00000563063 1520 ntBASIC13.79□□□□□ -0.2
RNF144AP50876 AC012617.1-204ENST00000586340 2305 ntBASIC13.79□□□□□ -0.2
RNF144AP50876 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF144AP50876 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNF144AP50876 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RNF144AP50876 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RNF144AP50876 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 ACKR1-201ENST00000368121 1240 ntBASIC13.78□□□□□ -0.2
RNF144AP50876 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 AC098614.1-201ENST00000368528 745 ntBASIC13.78□□□□□ -0.2
RNF144AP50876 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 COX5BP8-201ENST00000416911 349 ntBASIC13.78□□□□□ -0.2
RNF144AP50876 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF144AP50876 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF144AP50876 CROCCP4-201ENST00000457096 498 ntBASIC13.78□□□□□ -0.2
RNF144AP50876 AC011495.1-201ENST00000498085 584 ntBASIC13.78□□□□□ -0.2
RNF144AP50876 USP32P1-208ENST00000506594 1164 ntBASIC13.78□□□□□ -0.2
RNF144AP50876 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF144AP50876 SLC25A47P1-201ENST00000531577 414 ntBASIC13.78□□□□□ -0.2
RNF144AP50876 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF144AP50876 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms