Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
USP8P40818 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
USP8P40818 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.16■□□□□ 0.18
USP8P40818 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
USP8P40818 PEG13-201ENST00000631594 5667 ntBASIC16.16■□□□□ 0.18
USP8P40818 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.16■□□□□ 0.18
USP8P40818 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
USP8P40818 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.16■□□□□ 0.18
USP8P40818 DUX4L47-201ENST00000566374 394 ntBASIC16.16■□□□□ 0.18
USP8P40818 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.16■□□□□ 0.18
USP8P40818 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.16■□□□□ 0.18
USP8P40818 AC138761.1-201ENST00000584393 385 ntBASIC16.16■□□□□ 0.18
USP8P40818 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.16■□□□□ 0.18
USP8P40818 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.16■□□□□ 0.18
USP8P40818 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.16■□□□□ 0.18
USP8P40818 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.16■□□□□ 0.18
USP8P40818 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
USP8P40818 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 MSTO2P-201ENST00000314835 1709 ntBASIC16.16■□□□□ 0.18
USP8P40818 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.16■□□□□ 0.18
USP8P40818 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP8P40818 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
USP8P40818 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
USP8P40818 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC16.15■□□□□ 0.18
USP8P40818 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
USP8P40818 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USP8P40818 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 ACKR1-201ENST00000368121 1240 ntBASIC16.15■□□□□ 0.18
USP8P40818 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.15■□□□□ 0.18
USP8P40818 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.15■□□□□ 0.18
USP8P40818 AP006294.1-201ENST00000415407 339 ntBASIC16.15■□□□□ 0.18
USP8P40818 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.15■□□□□ 0.18
USP8P40818 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 GIMAP3P-201ENST00000495150 836 ntBASIC16.15■□□□□ 0.18
USP8P40818 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
USP8P40818 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.15■□□□□ 0.18
USP8P40818 AC009486.1-201ENST00000569860 813 ntBASIC16.15■□□□□ 0.18
USP8P40818 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
USP8P40818 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USP8P40818 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
USP8P40818 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP8P40818 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.15■□□□□ 0.18
USP8P40818 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP8P40818 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP8P40818 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP8P40818 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP8P40818 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP8P40818 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.14■□□□□ 0.17
USP8P40818 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms