Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGAP10645 AC073869.2-201ENST00000417338 1026 ntBASIC20.98■□□□□ 0.95
CHGAP10645 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.98■□□□□ 0.95
CHGAP10645 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.98■□□□□ 0.95
CHGAP10645 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHGAP10645 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC20.98■□□□□ 0.95
CHGAP10645 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC20.98■□□□□ 0.95
CHGAP10645 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.98■□□□□ 0.95
CHGAP10645 AL354861.1-201ENST00000445213 355 ntBASIC20.98■□□□□ 0.95
CHGAP10645 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHGAP10645 CD164-210ENST00000512821 964 ntTSL 2 BASIC20.98■□□□□ 0.95
CHGAP10645 ALG1L13P-202ENST00000519320 584 ntBASIC20.98■□□□□ 0.95
CHGAP10645 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC20.98■□□□□ 0.95
CHGAP10645 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGAP10645 AC132872.4-202ENST00000622924 2756 ntBASIC20.98■□□□□ 0.95
CHGAP10645 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGAP10645 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGAP10645 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.98■□□□□ 0.95
CHGAP10645 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHGAP10645 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC20.98■□□□□ 0.95
CHGAP10645 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHGAP10645 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHGAP10645 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHGAP10645 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.98■□□□□ 0.95
CHGAP10645 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHGAP10645 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHGAP10645 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHGAP10645 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHGAP10645 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHGAP10645 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC20.97■□□□□ 0.95
CHGAP10645 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC20.97■□□□□ 0.95
CHGAP10645 NEU3-207ENST00000534628 746 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 HERC2P11-201ENST00000562845 725 ntBASIC20.97■□□□□ 0.95
CHGAP10645 AC100756.2-201ENST00000569537 736 ntBASIC20.97■□□□□ 0.95
CHGAP10645 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CHGAP10645 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHGAP10645 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHGAP10645 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.97■□□□□ 0.95
CHGAP10645 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.97■□□□□ 0.95
CHGAP10645 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.97■□□□□ 0.95
CHGAP10645 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHGAP10645 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.96■□□□□ 0.95
CHGAP10645 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHGAP10645 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC20.96■□□□□ 0.95
CHGAP10645 ST13P19-201ENST00000442505 1124 ntBASIC20.96■□□□□ 0.95
CHGAP10645 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CHGAP10645 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 LINC00431-202ENST00000636375 159 ntBASIC20.96■□□□□ 0.95
CHGAP10645 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHGAP10645 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms