Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 AL627095.1-201ENST00000414775 321 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 GALP-202ENST00000440823 889 ntTSL 5 BASIC9.07□□□□□ -0.96
PKHD1P08F94 OR52V1P-201ENST00000515557 898 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC9.07□□□□□ -0.96
PKHD1P08F94 CDC37P2-201ENST00000562287 1029 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC9.07□□□□□ -0.96
PKHD1P08F94 ACE3P-201ENST00000423435 1973 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 AC092115.1-201ENST00000566277 1402 ntBASIC9.06□□□□□ -0.96
PKHD1P08F94 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 AC005722.1-201ENST00000431878 964 ntBASIC9.06□□□□□ -0.96
PKHD1P08F94 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 MBP-230ENST00000528160 584 ntTSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 MYL6-215ENST00000549566 685 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC9.06□□□□□ -0.96
PKHD1P08F94 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
PKHD1P08F94 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
PKHD1P08F94 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
PKHD1P08F94 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC9.06□□□□□ -0.96
PKHD1P08F94 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC9.06□□□□□ -0.96
PKHD1P08F94 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 AL450346.2-201ENST00000495602 1024 ntBASIC9.06□□□□□ -0.96
PKHD1P08F94 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 ACTBP9-201ENST00000587663 1099 ntBASIC9.06□□□□□ -0.96
PKHD1P08F94 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 ZEB1-AS1-208ENST00000607166 2503 ntBASIC9.06□□□□□ -0.96
PKHD1P08F94 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 GH1-203ENST00000351388 685 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC9.06□□□□□ -0.96
PKHD1P08F94 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 UGT1A12P-201ENST00000447084 853 ntBASIC9.06□□□□□ -0.96
PKHD1P08F94 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC9.06□□□□□ -0.96
PKHD1P08F94 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
PKHD1P08F94 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 KRT8P38-201ENST00000441370 1430 ntBASIC9.06□□□□□ -0.96
PKHD1P08F94 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
PKHD1P08F94 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC9.06□□□□□ -0.96
PKHD1P08F94 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PKHD1P08F94 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms