Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.35□□□□□ -0.11
KRT6AP02538 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
KRT6AP02538 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 AC090505.1-201ENST00000430515 1834 ntBASIC14.34□□□□□ -0.11
KRT6AP02538 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KRT6AP02538 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 PTENP1-202ENST00000532280 3996 ntBASIC14.34□□□□□ -0.11
KRT6AP02538 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.34□□□□□ -0.11
KRT6AP02538 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.34□□□□□ -0.11
KRT6AP02538 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 AC002472.2-201ENST00000442739 958 ntBASIC14.34□□□□□ -0.11
KRT6AP02538 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.34□□□□□ -0.11
KRT6AP02538 MIR6074-201ENST00000612054 107 ntBASIC14.34□□□□□ -0.11
KRT6AP02538 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
KRT6AP02538 AL928921.2-201ENST00000641325 2442 ntBASIC14.34□□□□□ -0.11
KRT6AP02538 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
KRT6AP02538 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6AP02538 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KRT6AP02538 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KRT6AP02538 AC015688.4-201ENST00000580780 1647 ntBASIC14.33□□□□□ -0.11
KRT6AP02538 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.33□□□□□ -0.11
KRT6AP02538 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KRT6AP02538 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KRT6AP02538 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
KRT6AP02538 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KRT6AP02538 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KRT6AP02538 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 AC011840.2-201ENST00000563063 1520 ntBASIC14.33□□□□□ -0.12
KRT6AP02538 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 MIR661-201ENST00000384842 89 ntBASIC14.33□□□□□ -0.12
KRT6AP02538 AC236430.1-201ENST00000402231 743 ntBASIC14.33□□□□□ -0.12
KRT6AP02538 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.33□□□□□ -0.12
KRT6AP02538 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.33□□□□□ -0.12
KRT6AP02538 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.33□□□□□ -0.12
KRT6AP02538 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.33□□□□□ -0.12
KRT6AP02538 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 GCOM2-201ENST00000509133 1104 ntBASIC14.33□□□□□ -0.12
KRT6AP02538 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.33□□□□□ -0.12
KRT6AP02538 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.33□□□□□ -0.12
KRT6AP02538 SPCS2P1-201ENST00000561636 679 ntBASIC14.33□□□□□ -0.12
KRT6AP02538 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.33□□□□□ -0.12
KRT6AP02538 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
KRT6AP02538 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
KRT6AP02538 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT6AP02538 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
KRT6AP02538 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT6AP02538 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.32□□□□□ -0.12
KRT6AP02538 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KRT6AP02538 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms