Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EXTL3O43909 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.94■□□□□ 0.14
EXTL3O43909 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.94■□□□□ 0.14
EXTL3O43909 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
EXTL3O43909 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
EXTL3O43909 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.93■□□□□ 0.14
EXTL3O43909 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.93■□□□□ 0.14
EXTL3O43909 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.93■□□□□ 0.14
EXTL3O43909 RN7SL832P-201ENST00000607781 1756 ntBASIC15.93■□□□□ 0.14
EXTL3O43909 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.93■□□□□ 0.14
EXTL3O43909 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.93■□□□□ 0.14
EXTL3O43909 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.93■□□□□ 0.14
EXTL3O43909 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
EXTL3O43909 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
EXTL3O43909 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.93■□□□□ 0.14
EXTL3O43909 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.93■□□□□ 0.14
EXTL3O43909 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.93■□□□□ 0.14
EXTL3O43909 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.93■□□□□ 0.14
EXTL3O43909 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.93■□□□□ 0.14
EXTL3O43909 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.93■□□□□ 0.14
EXTL3O43909 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.93■□□□□ 0.14
EXTL3O43909 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
EXTL3O43909 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
EXTL3O43909 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
EXTL3O43909 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.93■□□□□ 0.14
EXTL3O43909 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.93■□□□□ 0.14
EXTL3O43909 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
EXTL3O43909 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
EXTL3O43909 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.92■□□□□ 0.14
EXTL3O43909 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 MIR1247-201ENST00000408206 136 ntBASIC15.92■□□□□ 0.14
EXTL3O43909 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.92■□□□□ 0.14
EXTL3O43909 GPAA1P2-201ENST00000417923 928 ntBASIC15.92■□□□□ 0.14
EXTL3O43909 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.92■□□□□ 0.14
EXTL3O43909 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.92■□□□□ 0.14
EXTL3O43909 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.92■□□□□ 0.14
EXTL3O43909 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.92■□□□□ 0.14
EXTL3O43909 AC005324.6-201ENST00000587972 613 ntBASIC15.92■□□□□ 0.14
EXTL3O43909 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.92■□□□□ 0.14
EXTL3O43909 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
EXTL3O43909 AC007663.3-201ENST00000609632 465 ntBASIC15.92■□□□□ 0.14
EXTL3O43909 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.92■□□□□ 0.14
EXTL3O43909 AL139099.5-201ENST00000635274 300 ntBASIC15.92■□□□□ 0.14
EXTL3O43909 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 AC018735.1-201ENST00000437208 1502 ntBASIC15.92■□□□□ 0.14
EXTL3O43909 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.92■□□□□ 0.14
EXTL3O43909 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.92■□□□□ 0.14
EXTL3O43909 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.92■□□□□ 0.14
EXTL3O43909 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.92■□□□□ 0.14
EXTL3O43909 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
EXTL3O43909 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 AC023908.3-201ENST00000564211 3047 ntBASIC15.92■□□□□ 0.14
EXTL3O43909 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EXTL3O43909 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
EXTL3O43909 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
EXTL3O43909 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms