Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AC092580.1-201ENST00000433998 658 ntBASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AL161932.2-201ENST00000435436 679 ntBASIC12.81□□□□□ -0.36
MBD3L3A6NE82 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 KRT8P1-201ENST00000557533 1207 ntBASIC12.81□□□□□ -0.36
MBD3L3A6NE82 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 FGD5P1-202ENST00000614866 2498 ntBASIC12.81□□□□□ -0.36
MBD3L3A6NE82 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
MBD3L3A6NE82 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 AC069218.1-201ENST00000435269 762 ntBASIC12.8□□□□□ -0.36
MBD3L3A6NE82 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 RN7SL277P-201ENST00000481521 288 ntBASIC12.8□□□□□ -0.36
MBD3L3A6NE82 AC130709.1-201ENST00000484779 1212 ntBASIC12.8□□□□□ -0.36
MBD3L3A6NE82 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L3A6NE82 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms