Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.09□□□□□ -0.15
LRCH1Q9Y2L9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRCH1Q9Y2L9 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LRCH1Q9Y2L9 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LRCH1Q9Y2L9 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.09□□□□□ -0.15
LRCH1Q9Y2L9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRCH1Q9Y2L9 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LRCH1Q9Y2L9 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
LRCH1Q9Y2L9 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRCH1Q9Y2L9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
LRCH1Q9Y2L9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LRCH1Q9Y2L9 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRCH1Q9Y2L9 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRCH1Q9Y2L9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.08□□□□□ -0.15
LRCH1Q9Y2L9 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 AL031432.2-201ENST00000566714 459 ntBASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 AL928711.1-201ENST00000570165 459 ntBASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.08□□□□□ -0.16
LRCH1Q9Y2L9 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 AC110048.1-201ENST00000604293 2157 ntBASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 AL157996.1-201ENST00000624684 2299 ntBASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 AC011840.2-201ENST00000563063 1520 ntBASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 ACTG1P14-201ENST00000446382 1122 ntBASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 AC004967.1-201ENST00000453589 447 ntBASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 AL691403.2-201ENST00000618460 490 ntBASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRCH1Q9Y2L9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRCH1Q9Y2L9 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms