Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 HINT2P1-201ENST00000419438 481 ntBASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 AL353637.1-201ENST00000451571 732 ntBASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 CICP11-201ENST00000434745 2827 ntBASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC008132.1-202ENST00000342005 1389 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 TMEM198B-204ENST00000484016 896 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 ALG3P1-201ENST00000508806 1114 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC009884.2-201ENST00000603110 324 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 NAP1L6-202ENST00000641404 1222 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC007292.2-201ENST00000593524 1812 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC020658.6-201ENST00000623564 1870 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AL138725.1-201ENST00000407347 1314 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC011840.2-201ENST00000563063 1520 ntBASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.88■□□□□ 0.13
SSX2IPQ9Y2D8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms