Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 AC016397.2-201ENST00000624848 1985 ntBASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 AC020910.6-201ENST00000623084 1459 ntBASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 AL035414.1-201ENST00000451327 857 ntBASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 HILS1-202ENST00000545329 423 ntBASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 MIR326-201ENST00000362220 95 ntBASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 GPR53P-205ENST00000457298 1084 ntBASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CSPG4P5Q96PW8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms