Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 FAM197Y7-201ENST00000432892 766 ntBASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 RN7SL48P-201ENST00000579283 293 ntBASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 AL138709.1-201ENST00000614840 1693 ntBASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSMEM1Q8WWF3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 WASH3P-207ENST00000560956 1394 ntBASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 TPM3P8-201ENST00000330554 643 ntBASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 RNU1-114P-201ENST00000365297 166 ntBASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 Z93015.1-201ENST00000451718 390 ntBASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 AC009542.2-202ENST00000619004 1067 ntBASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 AL645728.2-202ENST00000641679 227 ntBASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.31□□□□□ -0.44
SSMEM1Q8WWF3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms