Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 BX640514.1-201ENST00000583223 1918 ntBASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 AL591846.1-201ENST00000451736 433 ntBASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 MIR4525-201ENST00000580000 75 ntBASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 AL358472.3-201ENST00000608147 415 ntBASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 GPR182-203ENST00000622922 591 ntBASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 AC002472.3-201ENST00000640124 621 ntBASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 AL161772.1-201ENST00000610494 4412 ntBASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD3Q6PCD5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AC079178.1-201ENST00000420915 656 ntBASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AC104306.2-201ENST00000451877 341 ntBASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AC104982.3-201ENST00000581995 514 ntBASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AL118558.3-201ENST00000607414 1079 ntBASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AC244157.2-201ENST00000616239 1006 ntBASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFWD3Q6PCD5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms