Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.96□□□□□ -0.49
CX3CL1P78423 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 AC092135.3-201ENST00000624151 1846 ntBASIC11.96□□□□□ -0.49
CX3CL1P78423 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CX3CL1P78423 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
CX3CL1P78423 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 KRT17P7-201ENST00000451704 1104 ntBASIC11.96□□□□□ -0.49
CX3CL1P78423 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.96□□□□□ -0.49
CX3CL1P78423 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.96□□□□□ -0.49
CX3CL1P78423 AP001889.1-201ENST00000525414 633 ntBASIC11.96□□□□□ -0.49
CX3CL1P78423 AC005225.4-201ENST00000557330 545 ntBASIC11.96□□□□□ -0.49
CX3CL1P78423 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CX3CL1P78423 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
CX3CL1P78423 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.96□□□□□ -0.49
CX3CL1P78423 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.96□□□□□ -0.49
CX3CL1P78423 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CX3CL1P78423 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CX3CL1P78423 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CX3CL1P78423 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CX3CL1P78423 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.96□□□□□ -0.5
CX3CL1P78423 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.96□□□□□ -0.5
CX3CL1P78423 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CX3CL1P78423 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 AC005229.1-201ENST00000392885 409 ntBASIC11.95□□□□□ -0.5
CX3CL1P78423 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.95□□□□□ -0.5
CX3CL1P78423 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.95□□□□□ -0.5
CX3CL1P78423 AC106760.1-201ENST00000508690 800 ntBASIC11.95□□□□□ -0.5
CX3CL1P78423 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 CR383656.12-201ENST00000549567 513 ntBASIC11.95□□□□□ -0.5
CX3CL1P78423 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.95□□□□□ -0.5
CX3CL1P78423 BTNL10-201ENST00000595971 695 ntBASIC11.95□□□□□ -0.5
CX3CL1P78423 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 IGHV3-72-202ENST00000621503 303 ntBASIC11.95□□□□□ -0.5
CX3CL1P78423 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CX3CL1P78423 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CX3CL1P78423 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.95□□□□□ -0.5
CX3CL1P78423 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CX3CL1P78423 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms