Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC6A4P31645 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 ACTG1P2-201ENST00000415776 1125 ntBASIC15.07■□□□□ 0
SLC6A4P31645 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.07■□□□□ 0
SLC6A4P31645 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 ACTG1P11-201ENST00000425411 1125 ntBASIC15.07■□□□□ 0
SLC6A4P31645 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 AC022447.6-201ENST00000515522 438 ntBASIC15.07■□□□□ 0
SLC6A4P31645 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.07■□□□□ 0
SLC6A4P31645 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.07■□□□□ 0
SLC6A4P31645 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.07■□□□□ 0
SLC6A4P31645 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.07■□□□□ 0
SLC6A4P31645 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
SLC6A4P31645 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
SLC6A4P31645 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 AC113367.3-201ENST00000508316 1912 ntBASIC15.07■□□□□ 0
SLC6A4P31645 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.07■□□□□ 0
SLC6A4P31645 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.07■□□□□ 0
SLC6A4P31645 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SLC6A4P31645 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 AC007686.3-201ENST00000619017 3487 ntBASIC15.07■□□□□ 0
SLC6A4P31645 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC6A4P31645 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A4P31645 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC6A4P31645 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
SLC6A4P31645 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC6A4P31645 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.06■□□□□ 0
SLC6A4P31645 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC6A4P31645 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC6A4P31645 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SLC6A4P31645 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.06■□□□□ 0
SLC6A4P31645 AP001267.2-201ENST00000532619 2086 ntBASIC15.06■□□□□ 0
SLC6A4P31645 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 KRT18P36-201ENST00000411618 1276 ntBASIC15.06■□□□□ 0
SLC6A4P31645 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A4P31645 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A4P31645 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.06■□□□□ 0
SLC6A4P31645 RN7SL774P-201ENST00000577467 290 ntBASIC15.06■□□□□ 0
SLC6A4P31645 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
SLC6A4P31645 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC6A4P31645 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.06■□□□□ 0
SLC6A4P31645 AC133540.1-201ENST00000620845 1019 ntBASIC15.06■□□□□ 0
SLC6A4P31645 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC6A4P31645 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A4P31645 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC6A4P31645 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A4P31645 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.06■□□□□ 0
SLC6A4P31645 AC215219.1-201ENST00000400706 1817 ntBASIC15.06■□□□□ 0
SLC6A4P31645 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC6A4P31645 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC6A4P31645 AC140479.7-201ENST00000636301 2332 ntBASIC15.05■□□□□ 0
SLC6A4P31645 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC6A4P31645 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC6A4P31645 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SLC6A4P31645 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC6A4P31645 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SLC6A4P31645 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A4P31645 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A4P31645 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A4P31645 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A4P31645 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms