Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH3P22223 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH3P22223 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH3P22223 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 AC027601.5-201ENST00000624065 2482 ntBASIC14.57□□□□□ -0.08
CDH3P22223 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH3P22223 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
CDH3P22223 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDH3P22223 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDH3P22223 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CDH3P22223 FAM8A4P-201ENST00000435433 1213 ntBASIC14.56□□□□□ -0.08
CDH3P22223 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 AL355994.2-201ENST00000447882 704 ntBASIC14.56□□□□□ -0.08
CDH3P22223 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.56□□□□□ -0.08
CDH3P22223 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH3P22223 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.56□□□□□ -0.08
CDH3P22223 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 RN7SL219P-201ENST00000582872 296 ntBASIC14.56□□□□□ -0.08
CDH3P22223 AC009542.2-202ENST00000619004 1067 ntBASIC14.56□□□□□ -0.08
CDH3P22223 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 AL137783.1-201ENST00000623494 1896 ntBASIC14.56□□□□□ -0.08
CDH3P22223 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH3P22223 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDH3P22223 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH3P22223 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH3P22223 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDH3P22223 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
CDH3P22223 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDH3P22223 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms