Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 AC022616.7-201ENST00000525383 220 ntBASIC12.84□□□□□ -0.35
UPK1BO75841 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 AC021087.4-201ENST00000563761 564 ntBASIC12.84□□□□□ -0.35
UPK1BO75841 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 AC092364.2-202ENST00000597012 1073 ntBASIC12.84□□□□□ -0.35
UPK1BO75841 AP006294.2-201ENST00000641667 209 ntBASIC12.84□□□□□ -0.35
UPK1BO75841 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 KRT8P14-201ENST00000414254 1442 ntBASIC12.84□□□□□ -0.35
UPK1BO75841 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UPK1BO75841 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.84□□□□□ -0.35
UPK1BO75841 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UPK1BO75841 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.84□□□□□ -0.35
UPK1BO75841 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.84□□□□□ -0.35
UPK1BO75841 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.84□□□□□ -0.35
UPK1BO75841 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UPK1BO75841 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
UPK1BO75841 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.83□□□□□ -0.35
UPK1BO75841 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.83□□□□□ -0.35
UPK1BO75841 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
UPK1BO75841 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
UPK1BO75841 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 AC124319.4-201ENST00000622931 2161 ntBASIC12.83□□□□□ -0.36
UPK1BO75841 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
UPK1BO75841 AL137783.1-201ENST00000623494 1896 ntBASIC12.83□□□□□ -0.36
UPK1BO75841 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 AC005014.1-201ENST00000432006 2976 ntBASIC12.83□□□□□ -0.36
UPK1BO75841 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK1BO75841 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
UPK1BO75841 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
UPK1BO75841 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
UPK1BO75841 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
UPK1BO75841 TSPY19P-201ENST00000418461 509 ntBASIC12.83□□□□□ -0.36
UPK1BO75841 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.83□□□□□ -0.36
UPK1BO75841 TSPY18P-201ENST00000441642 509 ntBASIC12.83□□□□□ -0.36
UPK1BO75841 TARDBPP1-201ENST00000442013 1203 ntBASIC12.83□□□□□ -0.36
UPK1BO75841 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.83□□□□□ -0.36
UPK1BO75841 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK1BO75841 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.83□□□□□ -0.36
UPK1BO75841 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.83□□□□□ -0.36
UPK1BO75841 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 AOC4P-203ENST00000566825 2289 ntBASIC12.83□□□□□ -0.36
UPK1BO75841 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.83□□□□□ -0.36
UPK1BO75841 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.83□□□□□ -0.36
UPK1BO75841 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
UPK1BO75841 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK1BO75841 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.83□□□□□ -0.36
UPK1BO75841 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 LINC00638-201ENST00000555578 2518 ntBASIC12.83□□□□□ -0.36
UPK1BO75841 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.83□□□□□ -0.36
UPK1BO75841 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK1BO75841 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 AC026992.2-203ENST00000563004 2419 ntBASIC12.82□□□□□ -0.36
UPK1BO75841 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms