Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 COX5BP1-201ENST00000507622 393 ntBASIC13.9□□□□□ -0.18
PRAMEF2O60811 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 ZNF767P-206ENST00000513792 565 ntBASIC13.9□□□□□ -0.18
PRAMEF2O60811 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRAMEF2O60811 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRAMEF2O60811 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRAMEF2O60811 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRAMEF2O60811 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRAMEF2O60811 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRAMEF2O60811 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRAMEF2O60811 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PRAMEF2O60811 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.9□□□□□ -0.19
PRAMEF2O60811 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PRAMEF2O60811 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PRAMEF2O60811 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 INTS4P1-203ENST00000641008 3683 ntBASIC13.89□□□□□ -0.19
PRAMEF2O60811 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 AC131206.1-201ENST00000538078 1211 ntBASIC13.89□□□□□ -0.19
PRAMEF2O60811 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 AC106820.3-201ENST00000561653 397 ntBASIC13.89□□□□□ -0.19
PRAMEF2O60811 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 OR10B1P-201ENST00000601666 907 ntBASIC13.89□□□□□ -0.19
PRAMEF2O60811 AL139099.5-201ENST00000635274 300 ntBASIC13.89□□□□□ -0.19
PRAMEF2O60811 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 AC092135.3-201ENST00000624151 1846 ntBASIC13.89□□□□□ -0.19
PRAMEF2O60811 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 AC232323.1-201ENST00000540724 2099 ntBASIC13.89□□□□□ -0.19
PRAMEF2O60811 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAMEF2O60811 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.89□□□□□ -0.19
PRAMEF2O60811 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.88□□□□□ -0.19
PRAMEF2O60811 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRAMEF2O60811 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRAMEF2O60811 AC139749.1-202ENST00000617529 3139 ntBASIC13.88□□□□□ -0.19
PRAMEF2O60811 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
PRAMEF2O60811 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
PRAMEF2O60811 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRAMEF2O60811 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PRAMEF2O60811 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.88□□□□□ -0.19
PRAMEF2O60811 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms