Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AL139094.1-201ENST00000405549 1188 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AC004945.1-201ENST00000416738 983 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 CNN2P2-201ENST00000443536 909 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 CNN2P3-201ENST00000450201 906 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AC125807.1-201ENST00000483097 614 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AC069120.2-201ENST00000524091 540 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AC092865.5-201ENST00000545435 363 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AC036164.1-201ENST00000570544 333 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AL049840.4-201ENST00000602422 811 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AL136317.3-201ENST00000618497 906 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 BX539320.1-201ENST00000623759 877 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 PRSS30P-206ENST00000641773 873 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 AC111170.3-201ENST00000624282 2464 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC099521.3-201ENST00000624251 2938 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC211486.1-202ENST00000416371 468 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC254562.1-201ENST00000417586 456 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms