Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN11AQ9UI33 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 RN7SL767P-201ENST00000493013 295 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 RNA5SP406-201ENST00000516106 112 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AL512310.5-201ENST00000551999 515 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AL022344.2-201ENST00000568976 968 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 CICP24-201ENST00000605464 2705 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 OR52M2P-201ENST00000414298 959 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AC084752.1-201ENST00000509766 622 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AP003398.1-201ENST00000531124 318 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 AC013553.1-201ENST00000560906 267 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 LINC00431-202ENST00000636375 159 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 ODCP-201ENST00000459650 1639 ntBASIC18.4■□□□□ 0.54
SCN11AQ9UI33 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN11AQ9UI33 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCN11AQ9UI33 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SCN11AQ9UI33 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCN11AQ9UI33 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCN11AQ9UI33 TUBB8P4-201ENST00000511806 1324 ntBASIC18.39■□□□□ 0.53
SCN11AQ9UI33 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 RN7SL23P-201ENST00000484055 275 ntBASIC18.39■□□□□ 0.53
SCN11AQ9UI33 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN11AQ9UI33 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 AC093909.3-201ENST00000504783 336 ntBASIC18.38■□□□□ 0.53
SCN11AQ9UI33 AC093826.1-201ENST00000508655 993 ntBASIC18.38■□□□□ 0.53
SCN11AQ9UI33 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 RN7SL556P-201ENST00000582856 298 ntBASIC18.38■□□□□ 0.53
SCN11AQ9UI33 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms